Pairwise Alignments

Query, 143 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

Subject, 312 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 3/138 (2%)

Query: 3   DNQVLNNVVFKAALSLESLDHAVRHCPRRSLGDPRIERAL--STLDGLLTTKVPASALAA 60
           DN +L   +   +L+     H       +SL  P    AL    LD + T  V   ALA 
Sbjct: 170 DNALLRESLIYTSLARLMSHHGASRPVEKSLR-PTAHLALVKQFLDDMPTADVSLDALAK 228

Query: 61  EAHLSLSQLQRLFASHLGLPVRRLVLWRRLRLSMVLILAGSAVTDAAHEAGFADSAHFSR 120
            A LS   L + F    GLP     +  R+RL+  +I  G  + + A   GF D +H +R
Sbjct: 229 LAGLSPFYLIKQFQRQYGLPPHAYQIQGRIRLAKQMIRQGCKLLEVALACGFHDQSHLNR 288

Query: 121 SLKKLFGVTARQALQHID 138
             K+  GVT  Q  + ++
Sbjct: 289 HFKRAMGVTPGQYAREVE 306