Pairwise Alignments

Query, 509 a.a., Tricarboxylate transport membrane protein TctA from Pseudomonas fluorescens FW300-N1B4

Subject, 508 a.a., Citrate uptake transporter, large transmembrane component TctA (from data) from Marinobacter adhaerens HP15

 Score =  364 bits (935), Expect = e-105
 Identities = 192/490 (39%), Positives = 298/490 (60%), Gaps = 5/490 (1%)

Query: 1   MSEFDSLLQGMNLILTPGHIGLMVIGVLLGILVGVLPGLGAPNGVALLLPLTFTMS--PV 58
           M     L+ G  + LTP ++   + G  +G L+G LPGLG  NGVA+L+PL FT+   P 
Sbjct: 1   METLGFLMDGFAVALTPYNLMFALFGAFVGTLIGCLPGLGPANGVAILIPLAFTLGLPPE 60

Query: 59  SAIILLSCMYWGALFGGSITSILFNIPGEPSSVATTFDGYPMAREGRAAEALTAAFSSAL 118
           +A+ILL+ +Y GA++GG I+SIL NIPG+  ++ T  DGYPMA++GRAA+AL  +  ++ 
Sbjct: 61  TAMILLTAVYAGAMYGGRISSILLNIPGDEPAMMTCLDGYPMAQKGRAADALAVSAIASF 120

Query: 119 IGALAGVLLLTFLSTKIAAFAMSFSSPEFFAVYLLAFCTFIGMSKNPPLKTVVAMMIGFA 178
            G L G + L  L+  +A FA++F   E+FA++LLAF T  G++   P+KTVVA  +G  
Sbjct: 121 AGGLIGTIGLIMLAPVLAKFALTFGPAEYFALFLLAFATLGGITGKNPVKTVVAATLGIM 180

Query: 179 MAAVGMDTVSGNLRLTFDQPILMTGISFEVAVIGLFGIGEILCTVEEGLVFRGEHARITP 238
           ++ VG+D  +G  R TF    L  GI F +A++GLF I E+L  VE  +    +   +  
Sbjct: 181 ISTVGIDISTGTQRYTFGVLELYEGIDFILAIVGLFAISELLFFVESRMGRGRDKMNVGK 240

Query: 239 MIILRTWAKLPRYWWTIVRSTLVGCWMGITPG-GPTAASFMSYSLARRFSKNRENFGKGE 297
           + +  T  +L     T +R  ++G   G+ PG G +  SF+SY+L ++    +  FG+G+
Sbjct: 241 LTL--TMKELVMTIPTQLRGGVLGFISGVLPGAGASLGSFISYTLEKQVVGKKGKFGEGD 298

Query: 298 LEGVIAPETADHAAGTSALLPMLTLGIPGSATAAVMLGGLMIWGLHPGPTLFVEQHDFVW 357
           + GV+APE  ++ A + AL+PMLTLG+PGS T AV+L  L+   + PGP +F +  D VW
Sbjct: 299 IRGVVAPEAGNNGASSGALVPMLTLGVPGSGTTAVLLAMLISLNITPGPLMFTQNADIVW 358

Query: 358 GLIASMYLGNVVSLIVVLATVPLFASILRIPFSIIAPIIIMVCAIGAYSVHNSFFDVVLM 417
           G+IA++ +GNV+ L++ +  V  F  +L +P   + PI+ MV  +G YS+ +S FD+  M
Sbjct: 359 GVIAALLIGNVLLLVLNIPLVGFFVKLLSVPPMYLLPIVTMVAFVGIYSISHSTFDLYFM 418

Query: 418 LGFGALGYLFKKLGYPIAPLVLAAVLGDKAEDAFRQSMLFSDGHIGIFWSNPLVGGLTTT 477
           + FG  GY  +KL  P+ P++L  +LG + E     +++ SDG   + W++PL  GL   
Sbjct: 419 VAFGVAGYFLRKLEIPLVPIILGLLLGPEMEKNLGHALVLSDGEWSVLWASPLAMGLWIV 478

Query: 478 ALLMLFWPLI 487
           A L L  P +
Sbjct: 479 AGLGLILPYL 488