Pairwise Alignments

Query, 509 a.a., Tricarboxylate transport membrane protein TctA from Pseudomonas fluorescens FW300-N1B4

Subject, 505 a.a., Tricarboxylate transport membrane protein TctA (from data) from Dinoroseobacter shibae DFL-12

 Score =  301 bits (770), Expect = 5e-86
 Identities = 172/488 (35%), Positives = 278/488 (56%), Gaps = 10/488 (2%)

Query: 5   DSLLQGMNLILTPGHIGLMVIGVLLGILVGVLPGLGAPNGVALLLPLTFTMS-PVSAIIL 63
           + LL G+    +  ++ +++ G L+G  +G+LPGLG  + +A+++P+  ++  P +A+IL
Sbjct: 3   EGLLIGLQTAFSIQNLAMVIGGCLIGTFIGMLPGLGPMSIIAIMIPVAISLGDPSAALIL 62

Query: 64  LSCMYWGALFGGSITSILFNIPGEPSSVATTFDGYPMAREGRAAEALTAAFSSALIGALA 123
           L+ +Y+GA+FGGS +SIL N PG   +VAT+FDGYPMA++G+A +ALT A  ++  G   
Sbjct: 63  LAGVYYGAIFGGSTSSILLNAPGVAGTVATSFDGYPMAQQGKAGKALTIAAIASFAGGTI 122

Query: 124 GVLLLTFLSTKIAAFAMSFSSPEFFA---VYLLAFCTFIGMSKNPPLKTVVAMMIGFAMA 180
           G +LL   +  +++ A+ F S E+FA   V L A   F G  +    K ++  ++G  MA
Sbjct: 123 GAILLMVFAPALSSVALLFHSAEYFALMVVGLSAIAAFAGTGQ--VAKALLMTILGLIMA 180

Query: 181 AVGMDTVSGNLRLTFDQPILMTGISFEVAVIGLFGIGEILCTVEEGLVFRGEHARITPMI 240
            VG   +  + R T     L +G  F    + +F + E L  V   L             
Sbjct: 181 TVGEGALFASPRFTMGLMDLQSGFGFITLAMAMFALPEALFLVMNPLRAASGQGGGEIKD 240

Query: 241 ILRTWAKLPRYWWTIVRSTLVGCWMGITPG-GPTAASFMSYSLARRFSKNREN--FGKGE 297
           +  T A+       I R ++ G ++G+ PG G T ASF+ Y++ R  +   E   FGKG 
Sbjct: 241 LRITRAEARSIAPVIGRQSVQGFFIGVLPGAGATIASFLGYAVERNIASKDEQAEFGKGS 300

Query: 298 LEGVIAPETADHAAGTSALLPMLTLGIPGSATAAVMLGGLMIWGLHPGPTLFVEQHDFVW 357
           ++G+ APETA++AA T + +P+LTLGIPGS T A++LG L+   + PGP L ++  +  W
Sbjct: 301 VKGLAAPETANNAACTGSFVPLLTLGIPGSGTTAILLGALLALNVSPGPRLMIDAPEIFW 360

Query: 358 GLIASMYLGNVVSLIVVLATVPLFASILRIPFSIIAPIIIMVCAIGAYSVHNSFFDVVLM 417
            +I SM++GN+V LI+ L  +P  A IL +P + + P I+    +GAY   N+  +++L+
Sbjct: 361 AVIMSMFIGNLVLLILNLPLIPYIAKILSVPRNYLIPFILFFTLMGAYIGQNNATELLLL 420

Query: 418 LGFGALGYLFKKLGYPIAPLVLAAVLGDKAEDAFRQSMLFSDGHIGIFWSNPLVGGLTTT 477
           +GFG    + K   YP+APL++  +LG   E+ F ++M   DG I   W  P+  GL   
Sbjct: 421 VGFGICATILKFADYPLAPLLIGFILGGLLENNFSRAMQLYDG-ISFIWERPMTLGLLVI 479

Query: 478 ALLMLFWP 485
           A L++  P
Sbjct: 480 AALLIILP 487



 Score = 24.6 bits (52), Expect = 0.009
 Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 21/135 (15%)

Query: 359 LIASMYLGNVVSLIVVLATVPLFASILRIPFSIIAPIIIMVCAIGAY--SVHNSFFDVVL 416
           +I    +G  + ++  L  + + A ++ +  S+  P   ++   G Y  ++       +L
Sbjct: 21  VIGGCLIGTFIGMLPGLGPMSIIAIMIPVAISLGDPSAALILLAGVYYGAIFGGSTSSIL 80

Query: 417 MLGFGALGYLFKKL-GYPIAPLVLAAVLGDKAEDAFRQSMLFSDGHIGIFWSNPLVGGLT 475
           +   G  G +     GYP+A          KA  A   + + S             GG  
Sbjct: 81  LNAPGVAGTVATSFDGYPMAQQ-------GKAGKALTIAAIAS-----------FAGGTI 122

Query: 476 TTALLMLFWPLISKV 490
              LLM+F P +S V
Sbjct: 123 GAILLMVFAPALSSV 137