Pairwise Alignments

Query, 509 a.a., Tricarboxylate transport membrane protein TctA from Pseudomonas fluorescens FW300-N1B4

Subject, 143 a.a., integral membrane protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 72.4 bits (176), Expect = 9e-18
 Identities = 41/133 (30%), Positives = 62/133 (46%)

Query: 55  MSPVSAIILLSCMYWGALFGGSITSILFNIPGEPSSVATTFDGYPMAREGRAAEALTAAF 114
           M P   ++ +  +Y  A  G  I +ILFNIPG   + AT  DGYPMA++G+  +AL  +F
Sbjct: 1   MDPQMGLVFMVTLYCAARMGAGIRAILFNIPGTAGAAATPQDGYPMAKQGKRQQALAISF 60

Query: 115 SSALIGALAGVLLLTFLSTKIAAFAMSFSSPEFFAVYLLAFCTFIGMSKNPPLKTVVAMM 174
            ++ +G L   +        +A       S E   V L        ++    LK +VA  
Sbjct: 61  VASALGGLLTTINALPAMPLLARTGSYVHSVEMIVVMLFGVLLIASIAAQGMLKGLVAGF 120

Query: 175 IGFAMAAVGMDTV 187
            G  + A+G D V
Sbjct: 121 FGLMIGAIGTDVV 133