Pairwise Alignments

Query, 281 a.a., ATPase associated with various cellular activities, AAA_5 from Pseudomonas fluorescens FW300-N1B4

Subject, 756 a.a., ATP-dependent Clp protease ATP-binding subunit clpA from Pseudomonas stutzeri RCH2

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 16/131 (12%)

Query: 30  LVKGEPGTGKTMLAEQLAESFGAKLITWHIKSTTKAHQGLYEYDAVSRLRDSQLGTEKVH 89
           L  G  G GKT  A QLA + G +LI + +    + H        VSRL  +  G     
Sbjct: 496 LFAGPTGVGKTEAARQLARALGVELIRFDMSEYMERH-------TVSRLIGAPPGYV--- 545

Query: 90  DVRNYLKKGKLWEAFESEERVILLIDEIDKADIEFPNDLLQELDKMEFYVYEIDETIKAK 149
               + + G L EA   +   +LL+DEI+KA  E  N LLQ +D         +   KA 
Sbjct: 546 ---GFDQGGLLTEAITKQPHCVLLLDEIEKAHPEVFNLLLQVMD---HGTLTDNNGRKAD 599

Query: 150 KRPIIIITSNN 160
            R +III + N
Sbjct: 600 FRNVIIIMTTN 610



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 1/21 (4%)

Query: 28  PLLVKGEPGTGKTMLAEQLAE 48
           PLLV GE G GKT +AE LA+
Sbjct: 214 PLLV-GEAGVGKTAIAEGLAK 233