Pairwise Alignments

Query, 230 a.a., Uracil-DNA glycosylase, family 1 from Pseudomonas fluorescens FW300-N1B4

Subject, 222 a.a., uracil-DNA glycosylase (RefSeq) from Shewanella loihica PV-4

 Score =  268 bits (686), Expect = 5e-77
 Identities = 121/216 (56%), Positives = 159/216 (73%), Gaps = 1/216 (0%)

Query: 13  WKEALRAEFDQPYMAELRTFLQQERAAGKEIYPPGPMIFNALNSTPLDKVKVVILGQDPY 72
           W++ +  E  Q Y  +L+ F+Q ER AGK IYP    +F+A   TPLDKV+VV++GQDPY
Sbjct: 7   WQDFIDQEAKQAYFGQLQAFVQGERDAGKAIYPEKDQVFSAFELTPLDKVRVVLIGQDPY 66

Query: 73  HGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLN-IDIPSHGYLQSWAEQGVLMLNTTM 131
           HG GQAHGLCFSVQPGV  PPSLVN+YKEL  D++  +IP HGYL  WAEQGVLMLNT +
Sbjct: 67  HGEGQAHGLCFSVQPGVKVPPSLVNMYKELASDIDGFEIPDHGYLAKWAEQGVLMLNTVL 126

Query: 132 TVERANANAHAGKGWQYFTDRIIEVVSEHQPHLVFLLWGAHAQSKQKLIDATKHLVLTSV 191
           TVE+  A++HA  GW+ FTD  +  ++E +  ++F+LWG HA  K KLI A +H +++  
Sbjct: 127 TVEQGKAHSHAKAGWETFTDNALRQLNEQERPIIFVLWGGHAMKKSKLIQAEQHHLVSGP 186

Query: 192 HPSPLSAYRGFLGCGHFSRANKFLEQNGETPIEWRL 227
           HPSPLSAYRGF GC HFS+ N+ L+ +GE PI+W++
Sbjct: 187 HPSPLSAYRGFFGCKHFSKINELLKASGEAPIDWQV 222