Pairwise Alignments

Query, 488 a.a., Alternative cytochrome c oxidase polypeptide CoxM (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 296 a.a., cytochrome c oxidase, subunit II from Pseudomonas stutzeri RCH2

 Score = 82.8 bits (203), Expect = 1e-20
 Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 60/270 (22%)

Query: 32  WGSIDTTLFITLIISGIFFIAITVFMAVAVMRYRHKEGSRAHYQPESKKLETWLI----I 87
           W     ++ + L++S ++  A    M      Y  ++  R + +        W+I    I
Sbjct: 10  WAMFGFSVLVLLVVSALWIYA----MLRRPQTYTDEQALRINRR--------WIIGGGLI 57

Query: 88  VTSIGIAAMLAPGLVVYSDFINVP---KNAYELEVVAQQWQWAFRFAGQDGKLGKSDIKF 144
           + ++ I A+LA G+      + +P   +    ++V+  QW W  R+              
Sbjct: 58  LPTVSIIALLAFGIPTGRGMLPLPVEGEQPLRIQVIGHQWWWEVRYP------------- 104

Query: 145 VDFTNPLGLDPKDPVGQDDVLIKSNEVRLPLDQPVKVLLRSKDVLHNFYIPQIRSKMDMV 204
                            +  ++ +N+  LP D+PV V + S DV+H+F++P++  K+DMV
Sbjct: 105 -----------------ESGVVTANQFILPADRPVDVEVTSADVIHSFWVPRLGGKLDMV 147

Query: 205 PGMVSYFWFTPTKTGKYEILCAEYCGLGHYNMRGQMIVEEQGAFDQWLNSQPTFAQTLTT 264
           PG  +      ++ G +   C+E+CG  H +M   +   E  AF  W+ ++         
Sbjct: 148 PGRTNTLRLQASQAGVFRGQCSEFCGSQHAHMILHVEALEADAFASWIEARRELQH---- 203

Query: 265 AAKPSQDSVLEKGRLLVEKYGCGACHSQDG 294
              PS D+    GR+  E+  CG CH   G
Sbjct: 204 -QPPSGDA----GRVFAER--CGQCHRVTG 226