Pairwise Alignments

Query, 488 a.a., Alternative cytochrome c oxidase polypeptide CoxM (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 314 a.a., alternative cytochrome C oxidase polypeptide II transmembrane protein from Sinorhizobium meliloti 1021

 Score =  311 bits (798), Expect = 2e-89
 Identities = 138/260 (53%), Positives = 195/260 (75%)

Query: 1   MAIAIILILIVIASVLFHVLAPWHATPAASNWGSIDTTLFITLIISGIFFIAITVFMAVA 60
           MA+ +IL+L+ + SVLFH+L+PW  TP ASNW  ID T+ IT  I+GI F A+ +FMA  
Sbjct: 1   MAVVVILVLLAVGSVLFHLLSPWWWTPIASNWNYIDNTITITFWITGIAFTAVVLFMAYC 60

Query: 61  VMRYRHKEGSRAHYQPESKKLETWLIIVTSIGIAAMLAPGLVVYSDFINVPKNAYELEVV 120
           V+R+RH+ G+ A Y+PE+++LE WL   T+ G+AAMLAPGL V++ F+ VP++A E+EV+
Sbjct: 61  VLRFRHRPGNTAAYEPENRRLEGWLATGTTFGVAAMLAPGLFVWNQFVTVPQDASEVEVI 120

Query: 121 AQQWQWAFRFAGQDGKLGKSDIKFVDFTNPLGLDPKDPVGQDDVLIKSNEVRLPLDQPVK 180
            QQW W+FR  G DGKLG ++ + +   N LG++  D  GQDD++I+  E+ LP+ +PVK
Sbjct: 121 GQQWLWSFRLPGADGKLGTTETRDIAPENTLGVNRDDAAGQDDIIIEGGELHLPVGKPVK 180

Query: 181 VLLRSKDVLHNFYIPQIRSKMDMVPGMVSYFWFTPTKTGKYEILCAEYCGLGHYNMRGQM 240
           +LLRS DVLH+FY+P+ R+KMDMVPGM++YFW TPT+TG +EILCAE CG+GH  MRG +
Sbjct: 181 MLLRSVDVLHDFYVPEFRAKMDMVPGMITYFWLTPTRTGTFEILCAELCGVGHPQMRGTV 240

Query: 241 IVEEQGAFDQWLNSQPTFAQ 260
           +V+ +  +  WL  Q TF+Q
Sbjct: 241 VVDTEEDYQAWLAEQQTFSQ 260