Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 293 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  162 bits (410), Expect = 9e-45
 Identities = 95/292 (32%), Positives = 151/292 (51%), Gaps = 4/292 (1%)

Query: 1   MSEMDDLAAFAVLIEAGSFTLAAQQLGCSKGQLSKRISLLETRFSVVLLQRTTRRLSLTA 60
           M   + +  F  + E+  F+ AA+QLG S   +S++++ LE R    L  RTTR +SLT 
Sbjct: 1   MDSFEGIVEFIAVAESNGFSAAARQLGLSTSHVSRQVARLEVRLGCALFARTTRSVSLTQ 60

Query: 61  AGAALLPQAQALVIQVERARQALARLKDDMAGPVRMTVPVSLGETFFDGALLEFSRQYPE 120
           AG     Q Q L++ + +A + + + +  ++G +R++   +  E +    L++F+RQ+P 
Sbjct: 61  AGQGYYRQCQNLLVGLRQANEEVTQQQLQLSGTLRVSAAGAFAEQYIAPVLIDFARQHPA 120

Query: 121 VQIELELNNNYRDLSRDGFDLAIRSEVANDERLVARPLLAWHEMTCASPAYLERFGEPLT 180
           + IE++ N+   +   +G D AIR     D  LVAR L     M  ASP YL  FG P T
Sbjct: 121 LTIEMDFNSRMVNFVEEGIDFAIRFGALKDSGLVARKLANRDMMAVASPQYLAEFGIPKT 180

Query: 181 PQALAEHRCLLNSHYSGREEWLYHQQHELLRVRVSGPFASNHYNLLKKAALSDAGIARLP 240
           PQ L  H C++    S  + WL+ Q    L ++V G + SN+   +  AA    GIA LP
Sbjct: 181 PQDLRLHSCII----SNNDHWLFQQGDGELSIKVEGRWRSNNVPAVIAAAEQHLGIAYLP 236

Query: 241 SYLLQEELADGRLRWLLRDYQTRSMPMYLVHPYQGGLPKRTQVLADYLIGWF 292
                  LA G L  +L  Y  R +  ++V+  +  LP R ++  D+L+  F
Sbjct: 237 KSSFIAPLAKGSLVPVLSSYWNRGITSWIVYQNRRFLPMRARMAIDHLLAHF 288