Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  182 bits (461), Expect = 1e-50
 Identities = 101/283 (35%), Positives = 158/283 (55%)

Query: 6   DLAAFAVLIEAGSFTLAAQQLGCSKGQLSKRISLLETRFSVVLLQRTTRRLSLTAAGAAL 65
           ++  F  ++E GSF+ AA++LG +K  +SKRIS LE    V L+QRTTRRL LT AG   
Sbjct: 6   NIPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTDAGRQY 65

Query: 66  LPQAQALVIQVERARQALARLKDDMAGPVRMTVPVSLGETFFDGALLEFSRQYPEVQIEL 125
                     +++A+ ALA  +  + G +++++P   G+      L EFSRQYP + +E+
Sbjct: 66  YEYVHQAAALMQQAQDALASQQGAVQGSLKVSLPNVFGQRHIAPLLSEFSRQYPTINLEV 125

Query: 126 ELNNNYRDLSRDGFDLAIRSEVANDERLVARPLLAWHEMTCASPAYLERFGEPLTPQALA 185
            L++   DL ++G D+ +R     D  LVA  L   H + CASP YL     P +   L 
Sbjct: 126 SLDDRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQSHPRSLADLR 185

Query: 186 EHRCLLNSHYSGREEWLYHQQHELLRVRVSGPFASNHYNLLKKAALSDAGIARLPSYLLQ 245
            H CL  S++ G  EW + ++ E+ R++  G    N+  ++++  L   GIA +P YL++
Sbjct: 186 GHNCLFYSYFRGGLEWSFERRGEVSRIKPRGNIKVNNSEVIRRLLLDGMGIALMPRYLVE 245

Query: 246 EELADGRLRWLLRDYQTRSMPMYLVHPYQGGLPKRTQVLADYL 288
           EELA G L  +L DYQ  +  +Y + P +  +P R +V  D+L
Sbjct: 246 EELAAGTLVPVLSDYQAPTHGIYALTPERQHMPARLRVFIDFL 288