Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 289 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  161 bits (407), Expect = 2e-44
 Identities = 92/288 (31%), Positives = 156/288 (54%), Gaps = 4/288 (1%)

Query: 1   MSEMDDLAAFAVLIEAGSFTLAAQQLGCSKGQLSKRISLLETRFSVVLLQRTTRRLSLTA 60
           M E + ++ F  + E  SFT A ++LG S  Q+S+++  LE R    LL RTTR++S+T 
Sbjct: 1   MQEWEGVSEFVAVAETESFTKAGKRLGISTAQVSRQVGALEQRLDTKLLYRTTRKVSMTE 60

Query: 61  AGAALLPQAQALVIQVERARQALARLKDDMAGPVRMTVPVSLGETFFDGALLEFSRQYPE 120
            G       + ++  +E A +AL+ L+    G +RMT PV+ GE +    + +F   YP 
Sbjct: 61  EGHLYYRHCRQVLDGLEEAERALSSLRGLPQGLLRMTAPVAYGEKYILPVVNDFLLAYPN 120

Query: 121 VQIELELNNNYRDLSRDGFDLAIRSEVANDERLVARPLLAWHEMTCASPAYLERFGEPLT 180
           V++++ L N    L   G DLAIR     D  L+A+ +       CASP YL+RFGEP +
Sbjct: 121 VEVDIALTNRQVRLVDAGIDLAIRIGKLADSSLIAKRISQRINYVCASPDYLKRFGEPHS 180

Query: 181 PQALAEHRCLLNSHYSGREEWLYHQQHELLRVRVSGPFASNHYNLLKKAALSDAGIARLP 240
              L+ H CL+ +H    + W + +Q    ++++ G    N  + L+ AAL   G+ +LP
Sbjct: 181 LSELSRHNCLIGNH----DYWRFLEQGRERQLKIKGNLRCNTGHGLRDAALKGLGLVQLP 236

Query: 241 SYLLQEELADGRLRWLLRDYQTRSMPMYLVHPYQGGLPKRTQVLADYL 288
           +Y + ++L  GRL  +L  YQ  +  ++ ++P    L  + +++ ++L
Sbjct: 237 NYYIGQDLKAGRLVSVLNAYQEPNEGVWALYPQNRHLSPKVKLMVEFL 284