Pairwise Alignments

Query, 342 a.a., Mobile element protein from Pseudomonas fluorescens FW300-N1B4

Subject, 343 a.a., Transposase IS116/IS110/IS902 (NCBI) from Rhodospirillum rubrum S1H

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 72/263 (27%), Positives = 114/263 (43%), Gaps = 19/263 (7%)

Query: 88  KNDFADAEAICEAATRPTMRFVPPKTQAQQ---ALAMSNSLRESFIKDRTATVNRIHAAL 144
           K D  DA  I         R V  KT + Q    L +   L +S + D    +  +    
Sbjct: 92  KTDRKDARGIAHLLRMGWFRPVHCKTNSAQEIRVLLVGRKLLQSKMGDLEQGIRGLLRGF 151

Query: 145 -LEVGVSLAPGFKT-IKEL---PALLEVSSFSERIKKNLMLLHGHFNYLDGQVKSLDKEV 199
            L+VGV     F   I+EL    A+LE  + +E + +    L   F  L  Q+ ++ +  
Sbjct: 152 GLKVGVISKGRFAARIRELVAGQAMLE--TVAEPMLRARDALRAEFTLLHRQILAIVRR- 208

Query: 200 ECQAAEDDLAARLMTMPCVGPITSSALAAELGDGKQFKCGRGYAASIGLVPKQHSTGDKT 259
                 DDL  RLMT+P VGP+ +    + + D  +F   +   A  GL PK++ +G+  
Sbjct: 209 ------DDLCRRLMTVPGVGPLVALTFKSGIDDPSRFTSSKTVGAHFGLTPKKYQSGETD 262

Query: 260 VLLGISKRGDRNQRRLLIQCARVYLMQLDRQKGALADWVRQLLASRHHSNLVVCALANKL 319
           +  GI++ GD   R  L + A+V L +  R   +L  W  + +A R        ALA KL
Sbjct: 263 ITGGITRTGDAMVRMALYEAAQVLLTRSQR-FSSLKRWALE-VAKRRGMKRAKVALARKL 320

Query: 320 ARIAWAIAAHHTEFDAGPAAMNA 342
           A +   +    ++F  G    +A
Sbjct: 321 ATVLHRMWIDGSDFRWGKEITSA 343