Pairwise Alignments

Query, 213 a.a., Ribonuclease HII (EC 3.1.26.4) from Pseudomonas fluorescens FW300-N1B4

Subject, 208 a.a., ribonuclease H (RefSeq) from Shewanella loihica PV-4

 Score =  215 bits (548), Expect = 4e-61
 Identities = 116/187 (62%), Positives = 133/187 (71%), Gaps = 3/187 (1%)

Query: 23  AGVDEVGRGPLCGAVVTAAVILDPSRPILGLNDSKKLTEARREALYDEICEKALSWYVAR 82
           AGVDEVGRGPL G VVTAAV+LDP+ PI GLNDSKKL+E +R+ALY+EI  KAL   V R
Sbjct: 21  AGVDEVGRGPLVGDVVTAAVVLDPNNPIEGLNDSKKLSEKKRDALYEEILAKALDVSVGR 80

Query: 83  AEVEEIDELNILHATMLAMQRAVEGLHIQPKLAMIDGNRCPKL---SMRAEAVIQGDGKV 139
               EIDELNILHATMLAMQRAV GL  +P   +IDGNR P     ++   AVI+GDG +
Sbjct: 81  CSPLEIDELNILHATMLAMQRAVAGLRARPDRVLIDGNRVPDFTDETLEGHAVIKGDGLI 140

Query: 140 PAIAAASILAKVSRDREMAAFELIYPGYGIGGHKGYPTPVHLEALARLGPTPIHRRSFAP 199
           PAI+AASI+AKV RDREM A +  YP YG   HKGYPT  H EAL   G    HR+SF P
Sbjct: 141 PAISAASIVAKVVRDREMEALDERYPEYGFAKHKGYPTKAHFEALEAHGVLAEHRKSFRP 200

Query: 200 VRLAYEA 206
           V+   EA
Sbjct: 201 VKERLEA 207