Pairwise Alignments

Query, 213 a.a., Ribonuclease HII (EC 3.1.26.4) from Pseudomonas fluorescens FW300-N1B4

Subject, 209 a.a., ribonuclease HII (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  239 bits (611), Expect = 2e-68
 Identities = 124/190 (65%), Positives = 146/190 (76%), Gaps = 5/190 (2%)

Query: 21  LVAGVDEVGRGPLCGAVVTAAVILDPSRPILGLNDSKKLTEARREALYDEICEKALSWYV 80
           LVAGVDEVGRGPL G VVTAAVILDP+RPILGLNDSKKLTE RREAL+DEICEKALS++V
Sbjct: 19  LVAGVDEVGRGPLVGDVVTAAVILDPNRPILGLNDSKKLTEKRREALFDEICEKALSFHV 78

Query: 81  ARAEVEEIDELNILHATMLAMQRAVEGLHIQPKLAMIDGNRCPK-----LSMRAEAVIQG 135
            RA   EIDELNILHATMLAMQRAV GL + P L ++DGNR P      LS+ + ++I+G
Sbjct: 79  GRASPAEIDELNILHATMLAMQRAVSGLKLTPALVLVDGNRSPAFTHQGLSLASHSIIKG 138

Query: 136 DGKVPAIAAASILAKVSRDREMAAFELIYPGYGIGGHKGYPTPVHLEALARLGPTPIHRR 195
           DG + +I+AASI+AKV+RDREM A +  YP YG   HKGYPT  H EA+A  G    +R+
Sbjct: 139 DGLIASISAASIIAKVTRDREMDALDAAYPQYGFAKHKGYPTKAHFEAIAEHGVFDQYRK 198

Query: 196 SFAPVRLAYE 205
           SF PV+   E
Sbjct: 199 SFKPVKALLE 208