Pairwise Alignments

Query, 213 a.a., Ribonuclease HII (EC 3.1.26.4) from Pseudomonas fluorescens FW300-N1B4

Subject, 220 a.a., ribonuclease HII (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  149 bits (375), Expect = 5e-41
 Identities = 93/207 (44%), Positives = 114/207 (55%), Gaps = 11/207 (5%)

Query: 15  VDEVVDLVAGVDEVGRGPLCGAVVTAAVILDPSRPILGLNDSKKLTEARREALYDEICEK 74
           V ++  + AG+DE GRG L G VV AAVIL     + GL DSKKLT ARRE+L + I   
Sbjct: 11  VADLPPVFAGIDEAGRGCLAGPVVAAAVILPQEYALPGLTDSKKLTAARRESLAEGIRSC 70

Query: 75  ALSWYVARAEVEEIDELNILHATMLAMQRAVEGLHIQPKLAMIDGNR-----------CP 123
           A++W +      +ID +NIL AT  AM RAV  L   P   +IDG++           C 
Sbjct: 71  AVTWGIGVVWPRDIDRINILQATFRAMARAVRVLRQPPPAILIDGDKTLPPHVLTSLSCD 130

Query: 124 KLSMRAEAVIQGDGKVPAIAAASILAKVSRDREMAAFELIYPGYGIGGHKGYPTPVHLEA 183
                  A+I GDG +PAI+AASILAK  RDR M   +  Y GYG   HKGY T  HL A
Sbjct: 131 GHLPTQRAIIGGDGCIPAISAASILAKTFRDRLMDTLDRRYHGYGFAKHKGYGTAEHLAA 190

Query: 184 LARLGPTPIHRRSFAPVRLAYEARENL 210
           +A  GP   HR +F  VR    A E L
Sbjct: 191 IAAHGPCAQHRLTFRGVRPNPAAEEQL 217