Pairwise Alignments

Query, 274 a.a., Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 275 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  150 bits (380), Expect = 2e-41
 Identities = 87/252 (34%), Positives = 146/252 (57%), Gaps = 11/252 (4%)

Query: 20  WGGLVFLHFPILIIFLYAFNTEDAAFSFPPKGFTLKWIGVAFSRPDVLEAIKLSLQIAAV 79
           WGG+ FL+ P+ I+  Y+FN       +   GF+ KW G  F    +L+A+  SL++A  
Sbjct: 16  WGGMFFLYAPMFILVFYSFNESKLVTVWG--GFSAKWYGELFRDDQILDAVATSLKVAFF 73

Query: 80  ATLIALILGTLASAALYR-RDFFGKQGISLMLILPIALPGIITGIALLATFKTLG----- 133
           A+ +A+ILGT+A+  + R    +GK  +S M+  P+ +P +ITG++LL  F  +      
Sbjct: 74  ASTMAVILGTMAAFVMTRFARSWGKMTLSNMITAPLVMPEVITGLSLLLLFVHMADLLGW 133

Query: 134 -IEPGMFTIIVGHATFCVVIVYNNVIARLRRTSYSLIEASMDLGADGWQTFRYIVLPNLG 192
             E GM T+ + H+TFC   V   V +RLR    S+ EA+ DLGA   +TF +I +P + 
Sbjct: 134 PAERGMLTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAQDLGATPLKTFFHITVPMIS 193

Query: 193 SAMLAGGMLAFALSFDEIIVTTFTAG-HERTLPLWLLNQLSRPRDVPVTNVVAMLVMMVT 251
            A++AG +L+F+LS D++++ +F +G    TLP+ + + + R    P  N +A L++++ 
Sbjct: 194 PALIAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSV-RMGVSPKINALATLIILIV 252

Query: 252 MLPILGAYYLTR 263
            L    ++YL R
Sbjct: 253 SLIAFISWYLAR 264