Pairwise Alignments

Query, 274 a.a., Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 275 a.a., putative spermidine/putrescine transport system permease protein from Paraburkholderia graminis OAS925

 Score =  129 bits (323), Expect = 9e-35
 Identities = 85/251 (33%), Positives = 129/251 (51%), Gaps = 4/251 (1%)

Query: 23  LVFLHFPILIIFLYAFNTEDAAFSFPPKGFTLKWIGVAFSRPDVLEAIKLSLQIAAVATL 82
           L+FL  PIL I   +FN+  + FS+P +GF+L+W   A + PD   A+  S+ I A +TL
Sbjct: 26  LLFLVAPILAIIPLSFNS-GSYFSYPMQGFSLRWYEQALTSPDWQRALLNSIGIGAASTL 84

Query: 83  IALILGTLASAALYRRDFFGKQGISLMLILPIALPGIITGIALLATFKTLGIEPGMFTII 142
           IA  LGTLA+  L R  F  +  I  ++I P+ +P ++        F  LG+      ++
Sbjct: 85  IATCLGTLAALGLSRAQFPLRSLIMPLIISPMIVPIVVVAAGFYLIFAPLGLVNSYPGVV 144

Query: 143 VGHATFCVVIVYNNVIARLRRTSYSLIEASMDLGADGWQTFRYIVLPNLGSAMLAGGMLA 202
           + HA      V   V A L    +SL+ A+  LGA  W  FR + LP +  A+  G + A
Sbjct: 145 LAHAALGTPFVVITVTASLLSFDHSLLRAASGLGARPWVAFRRVTLPLITPAVATGSVFA 204

Query: 203 FALSFDEIIVTTFTAGHER-TLPLWLLNQLSRPRDVPVTNVVAMLVMMVTMLPILGAYYL 261
           FA SFDE+IV  F  G ++ T+P  + + +    D  +  V  ML++   +L  L +   
Sbjct: 205 FATSFDEVIVILFIGGPDQTTVPRRMWSGIRDSIDPSILAVATMLIVFAVLL--LASIGW 262

Query: 262 TRGGESVAGSG 272
            RG  + AG G
Sbjct: 263 LRGRHAAAGEG 273