Pairwise Alignments

Query, 433 a.a., Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 542 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  161 bits (407), Expect = 5e-44
 Identities = 127/417 (30%), Positives = 194/417 (46%), Gaps = 25/417 (5%)

Query: 13  AYQYPLLIKRLLMSGARYEKTREIIYRDQLRYSYPTLIERVARLANVLTAAGVKAGDTVA 72
           A   PL     L   A+    R  +   + RY++    +R  RLA+ L A G+   DTVA
Sbjct: 14  ANHVPLTPLAFLDRAAQVFPDRPSLVHGKRRYTWAETAQRARRLASALRARGIGPEDTVA 73

Query: 73  VMDWDSHRYLECMFAIPMIGAVIHTINVRLSPEQILYTMNHAEDRFVLVNSEFVGLYKAI 132
           VM  ++    E  F +PM GAV++ +NVRL+ E+I + + H E R +L ++EF  +   I
Sbjct: 74  VMGANTPELYEAHFGVPMAGAVLNALNVRLNAEEIAFILEHGEARVLLTDTEFSPI---I 130

Query: 133 AGHLTTVEKTLLLTDLPEKTADLPN-LIG--EYEQLLATASPQYDFE-DFDENSVATTFY 188
           A  L  +++ + + D+ +   D P   +G  EYE  LA   P  D+    DE    T  Y
Sbjct: 131 ADALARIDRPITVIDIVDPEYDGPGACVGEMEYEAFLAEGDPTADWRWPADEWESITLNY 190

Query: 189 TTGTTGNPKGVYFTHRQLVLHTMGVSTIMGSIDSVRLLGTNDVYMPITPMFHVHAWGLPY 248
           T+GTTGNPKGV + HR   L+ +      G       +  + VY+   PMFH + W  P+
Sbjct: 191 TSGTTGNPKGVVYHHRGAYLNALSNIITWG-------MPHHAVYLWTLPMFHCNGWCFPW 243

Query: 249 VATMLGLKQVYPGRYDPEYLVELWRKEKVTFSHCVPTILQMVLNAKAAQNTDFGGWKIVI 308
                    V   R     + +   +EKV+     P +L  ++NA+  +   F     V+
Sbjct: 244 TMAANAGTNVCLRRVTAAGIFQAIAEEKVSHFCGAPIVLSFLINARPEERRSFDHQVNVM 303

Query: 309 GGSALNRA-LYEAAKAKGIQLTAAYGMSET-GPLVSCA---HLNDELMAGTEDERTTYRI 363
             +A   A + E  + +G  +T  YG++ET GP   CA     ND  M    DE+   + 
Sbjct: 304 TAAAPPPASVLEKMQREGFCVTHVYGLTETYGPATVCAWKEPWNDLPM----DEQARLKS 359

Query: 364 KAGVPGPLVEAAIVDTDGNF--LPADGETQGELVLRAPWLTEGYFNEPHKGAELWAG 418
           + GV   + E  +V        +PADGE+ GE+  R     +GY   P   AE + G
Sbjct: 360 RQGVRYLVQEGLMVGDPETMEAVPADGESMGEVFFRGNITMKGYLKNPEATAEAFRG 416