Pairwise Alignments

Query, 433 a.a., Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 546 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  242 bits (618), Expect = 2e-68
 Identities = 153/417 (36%), Positives = 211/417 (50%), Gaps = 21/417 (5%)

Query: 17  PLLIKRLLMSGARYEKTREIIYRDQ----LRYSYPTLIERVARLANVLTAAGVKAGDTVA 72
           PLL+  ++   AR     E++ R       R +Y     R  RLA  L   G   GD + 
Sbjct: 10  PLLLSGVIEHAARCHGETEVVSRRDDGTLHRQTYADTASRARRLARALIELGAAPGDAIG 69

Query: 73  VMDWDSHRYLECMFAIPMIGAVIHTINVRLSPEQILYTMNHAEDRFVLVNSEFVGLYKAI 132
            + W+ +R+LE  + +P  G V HTIN RL  EQI + +  A DRF+ V+  F+GL   I
Sbjct: 70  TLAWNGNRHLELYYGVPGAGMVCHTINPRLFAEQIAFIIKDAGDRFLFVDPGFLGLLAGI 129

Query: 133 AGHLTTVEKTLLLTD-LPEKTADLPNLIGEYEQLLATASPQYDFEDFDENSVATTFYTTG 191
              L  +E  +++ D  P        L+   E L A     +D+  FDEN+ A   YT+G
Sbjct: 130 LPDLPALEAVVVMDDHAPAAELAGVRLLAYEEVLAAQTDDAFDWPSFDENAAAGICYTSG 189

Query: 192 TTGNPKGVYFTHRQLVLHTMGVSTIMGSIDSVRLLGTNDVYMPITPMFHVHAWGLPYVAT 251
           TTGNPKGV ++HR  +LH +           V  L   D  MP+ PMFHV+AWG+P+ A 
Sbjct: 190 TTGNPKGVVYSHRSTILHALSAVQ-----PDVFALSARDTVMPVVPMFHVNAWGMPHAAP 244

Query: 252 MLGLKQVYP-GRYDPEYLVELWRKEKVTFSHCVPTILQMVLNAKAAQNTDFGGW----KI 306
           M+G K V P GR D   L+EL R E+VT +  VPT+ Q +L    A+    GG     ++
Sbjct: 245 MVGAKLVLPGGRLDGASLIELIRGEQVTATAGVPTVWQGLLGHVEAKG---GGLAPLDRV 301

Query: 307 VIGGSALNRALYEAAKAKGIQLTAAYGMSETGPLVSCAHLNDELMAGTEDERTTYRIKAG 366
           VIGG+A  +++     A G +   A+GM+ET PL   + L        EDE    R+K G
Sbjct: 302 VIGGAACPQSMMSRFAALGTRAIHAWGMTETSPLCVASVLTARHRDLGEDEALRLRLKQG 361

Query: 367 VPGPLVEAAIVDTDGNFLPADGETQGELVLRAPWLTEGYFNEPHK---GAELWAGAG 420
            P    E  IVD  G  LP DG T+G L +R PW+  GY N P +    A+ W   G
Sbjct: 362 RPAFGAELRIVDHAGRALPWDGVTRGMLEVRGPWICAGYLNNPDRTAFSADGWFATG 418