Pairwise Alignments

Query, 433 a.a., Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 539 a.a., medium-chain-fatty-acid--CoA ligase AlkK from Phaeobacter inhibens DSM 17395

 Score =  202 bits (515), Expect = 2e-56
 Identities = 127/358 (35%), Positives = 187/358 (52%), Gaps = 14/358 (3%)

Query: 55  RLANVLTAAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVIHTINVRLSPEQILYTMNHA 114
           +LA  L   G+  G     + W++ R+LE  F +   G V HTIN RL PEQ++Y +NHA
Sbjct: 51  KLAAALGRLGIAQGARCGTIAWNNRRHLEIYFGVSGGGYVCHTINPRLKPEQLIYIINHA 110

Query: 115 EDRFVLVNSEFVGLYKAIAGHLTTVEKTLLLTDLPEKTADLPNLIGEYEQLLATASPQYD 174
           ED+ + +++ FV     +    TTV+  +++       A     +  Y+ +L   +  YD
Sbjct: 111 EDQVLFIDTTFVPAVAQLRAQFTTVQHIVVMGPKDADIAAQIEGVLFYDDVLDAEAAGYD 170

Query: 175 FEDFDENSVATTFYTTGTTGNPKGVYFTHRQLVLHTMGVSTIMGSIDSVRLLGTNDVYMP 234
           + D DEN  ++  YT+GTTGNPKGV +THR  VLHT+G     G+      L   D  + 
Sbjct: 171 WPDLDENLPSSLCYTSGTTGNPKGVEYTHRTSVLHTIG-----GNQPDGLALRARDTVLA 225

Query: 235 ITPMFHVHAWGLPYVATMLGLKQVYPGRY-DPEYLVELWRKEKVTFSHCVPTI-LQMVLN 292
           + PMFHV+AWG PY+   +G K V PG + D   L  L   EKVT +  VPTI + ++  
Sbjct: 226 VVPMFHVNAWGTPYMTAAVGAKLVLPGPHLDGVSLARLIDAEKVTVALGVPTIWMGLLQG 285

Query: 293 AKAAQNTDFGGWKIVIGGSALNRALYEAAKAK-GIQLTAAYGMSETGPLVSCAHLNDELM 351
            +    T     + ++GGSAL   +    + K G+ L  A+GM+ET P+     LN  L 
Sbjct: 286 LEETGCTAESLERTIVGGSALPTVMIPTFRDKYGVDLVHAWGMTETSPI---GTLNQLLQ 342

Query: 352 AGTE-DERTTYRIKAGVPGPL--VEAAIVDTDGNFLPADGETQGELVLRAPWLTEGYF 406
              E D     +++ G   P+  ++  IVD  G  LP DGETQG L +   W+ + YF
Sbjct: 343 KHNELDAEAQAKLREGQGRPMYGIDLRIVDDSGAVLPHDGETQGNLQICGHWVIDSYF 400