Pairwise Alignments

Query, 433 a.a., Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 541 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  156 bits (394), Expect = 2e-42
 Identities = 117/390 (30%), Positives = 186/390 (47%), Gaps = 14/390 (3%)

Query: 34  REIIYRDQLRYSYPTLIERVARLANVLTAAGVKAGDTVAVMDWDSHRYLECMFAIPMIGA 93
           RE +     R++Y     RV+RLA+ L  AG+  GD VA +  +    +E  F +P  GA
Sbjct: 36  REAVVYGARRFTYAEYHARVSRLASALAGAGIAPGDVVATLLPNIPAMVEAHFGVPACGA 95

Query: 94  VIHTINVRLSPEQILYTMNHAEDRFVLVNSEFVGLYKAIAGHLTTVEKTLLLTDLPEKTA 153
           V++TIN+RL  + + Y ++H   + VLV+S+F+ L       L       LL ++ +  A
Sbjct: 96  VLNTINIRLDVDTVAYILSHGGAKAVLVDSQFLPLAAEACERLD--GPAPLLIEVADDAA 153

Query: 154 DLPNLIG--EYEQLLATASPQYDF-EDFDENSVATTFYTTGTTGNPKGVYFTHRQLVLHT 210
            +  L G  EYE  LA   P + +    DE       YT+GTTG PKGV + HR   L T
Sbjct: 154 GVHALGGYTEYEDFLAGGDPDFPWIMPRDEWESLALNYTSGTTGRPKGVVYHHRGAYLMT 213

Query: 211 MGVSTIMGSIDSVRLLGTNDVYMPITPMFHVHAWGLPYVATMLGLKQVYPGRYDPEYLVE 270
                 MG++ S R++     ++ I P+FH + W   ++  MLG   V       + +  
Sbjct: 214 ------MGTVISWRMV-LYPRWLAIVPLFHCNGWNHSWMMPMLGGTVVCCRDVSAQAIYT 266

Query: 271 LWRKEKVTFSHCVPTILQMVLNAKAAQNTDFGGW-KIVIGGSALNRALYEAAKAKGIQLT 329
              +  VT     P +L M++NA  A    F    ++   G+    A   A +  G  +T
Sbjct: 267 AIAENGVTHFGGAPIVLNMIVNAPDAARRPFSHTVEVFTAGAPPAAATLAAIEELGFNVT 326

Query: 330 AAYGMSETGPLVSCAHLNDELMAGTEDERTTYRIKAGVPGPLVE-AAIVDTDGNFLPADG 388
             YG++ET   V+    N +     + ER   + + GV  P +E   ++D +   +P DG
Sbjct: 327 QVYGLTETYGHVTECVWNPDWDTLPQAERAAIKARQGVALPQMEHITVMDPEMRQVPMDG 386

Query: 389 ETQGELVLRAPWLTEGYFNEPHKGAELWAG 418
            T GE+++R   + +GY+  P   AE +AG
Sbjct: 387 ATTGEVMMRGNSVMKGYYRNPDATAEAFAG 416