Pairwise Alignments

Query, 366 a.a., GTP-binding and nucleic acid-binding protein YchF from Pseudomonas fluorescens FW300-N1B4

Subject, 366 a.a., GTP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  382 bits (981), Expect = e-111
 Identities = 201/368 (54%), Positives = 258/368 (70%), Gaps = 4/368 (1%)

Query: 1   MGFNCGIVGLPNVGKSTLFNALTKSGIA-AENFPFCTIEPNTGIVPMPDPRLEALAAIVN 59
           M  + GIVGLPNVGKSTLFNALTK+  A A N+PFCTIEPN   V +PD RL+ALA IV 
Sbjct: 1   MALSIGIVGLPNVGKSTLFNALTKAQNAEAANYPFCTIEPNKATVAVPDKRLDALAEIVK 60

Query: 60  PKRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSV 119
           P+R+L  T++F+DIAGLV GASKGEGLGN+FLANIRE  AI  VVRCF+DEN+ HV  ++
Sbjct: 61  PQRVLHATVDFIDIAGLVRGASKGEGLGNQFLANIRECAAILEVVRCFDDENITHVDGAI 120

Query: 120 DPKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKALLEQLIAHFTLGKPAR 179
           DP RDIE I+ EL+ AD+ S EK+ +++ + AK GDKDA      + +L+ H   G PA 
Sbjct: 121 DPLRDIETIETELLLADIQSAEKRFERLQKMAK-GDKDAKAAAEEVARLLEHMNAGNPAS 179

Query: 180 TLMKNMGADDKAVIRGFHLLTTKPVMYIANVAEDGF-ENNPLLDIVKAIAEEEGAMVVPV 238
           T         +   R   LLT K ++Y ANV E G  E N  +  V+ +A   GA VV +
Sbjct: 180 TFEARESDAFQLAWREMGLLTAKKIIYCANVDETGIGEENAHVLRVRELAASRGADVVKI 239

Query: 239 CNKIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYEMLHLQTYFTAGVEEVRAWTV 298
           C KIE E+  L D E+ +M L + G++E GL  +IR GY  L L +YFTAG +EVRAWT+
Sbjct: 240 CAKIEEELQGLSDEEQAEM-LGSYGIDESGLVSIIRTGYHTLGLASYFTAGEKEVRAWTI 298

Query: 299 RVGATAPQAAGVIHTDFEKGFIRAEVIAYDDFIQYKGEAGTKEAGKWRLEGKDYIVKDGD 358
           + G  APQ AGVIHTDFE+GFIRAEVIAYDD+++++ EA  + AG  R+EGK+Y+++DGD
Sbjct: 299 KQGWKAPQGAGVIHTDFERGFIRAEVIAYDDYVKHRSEAACRSAGVLRVEGKEYVMQDGD 358

Query: 359 VMHFRFNV 366
           V+HF FNV
Sbjct: 359 VVHFLFNV 366