Pairwise Alignments

Query, 982 a.a., Two-component sensor CbrA: intrcellular carbon:nitrogen balance from Pseudomonas fluorescens FW300-N1B4

Subject, 671 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  142 bits (358), Expect = 7e-38
 Identities = 116/399 (29%), Positives = 186/399 (46%), Gaps = 52/399 (13%)

Query: 624 ELDALRRYHRQTLQELPMGVCSLAKDQEILMWNKAMEELTGIAAQRVVGSRLSTIADPWK 683
           +L   ++Y    +  +P  + +L +   +  WN+    L+G      +   +    +P K
Sbjct: 281 KLTGFQKYLNSIIDSMPSALIALDEQLYVTQWNQEASALSGTPLDDALNQPVFVAFEPLK 340

Query: 684 ELLQGFINLPDEHLHKQHLALDGQTRWLNL----HKAAIDEPLA-PGNSGLVLLVEDLTE 738
             L       ++H+    +A   +  WL      H A    PL   G  G+V+ ++D+T+
Sbjct: 341 PFLAQIRRTSEQHV----VAKIERVTWLRNDEPHHYALTCYPLTGAGGRGVVIRIDDITQ 396

Query: 739 TQMLEDKLVHSERLASIGRLAAGVAHEIGNPITGIACLAQNLRE----EREDDTELTEIS 794
              +E+ +V SE++ S+G LAAG+AHEI NP+  I   AQN+R     E E + E  E +
Sbjct: 397 RINMEEMMVQSEKMLSVGSLAAGMAHEINNPLGAILHNAQNIRRRLSPELERNREAAEET 456

Query: 795 GQILEQTK--------------------RVSRIVQSLMSFAHAGSYQHSD--EPVCLAEV 832
           G  LE                       R ++IV  ++SF+   + Q +D   PV + + 
Sbjct: 457 GVRLEAVNQYLQRREVPQLLDGIQQAGSRAAKIVSHMLSFSRMSNRQLADCHLPVLIDQA 516

Query: 833 AQDAIGLLALNRRNFEVQFYNLC-DPDHWVEGDP---QRLAQVLINLLSNARDA------ 882
            + A    AL    F+ +  ++  D D  V+  P     L QVL+NLL NA  A      
Sbjct: 517 LEIAGNDFAL-MEGFDFKAIDIVRDFDPRVDRVPCIGNELEQVLLNLLKNAAQAIHAHQV 575

Query: 883 SPPGSAVRVKSEAGEHTVDLIVEDEGSGIPSSIMDRLFEPFFTTKDPGEGTGLGLALVYS 942
             PG  + +++       ++ VED G GIP ++  R+FEPFFTTK+ G+GTGLGL++ Y 
Sbjct: 576 GEPGQII-LRTRLNPPWAEIQVEDNGGGIPENVRKRIFEPFFTTKEVGQGTGLGLSVSYF 634

Query: 943 IV-EEHYGQITIDSPADVQSQRGTRIRVTLPRHVEATSA 980
           I+   H GQ+ +      Q   GT   + LP +  A  A
Sbjct: 635 IITNNHQGQMEV----QCQPGHGTTFTLRLPLNSPAEPA 669