Pairwise Alignments

Query, 982 a.a., Two-component sensor CbrA: intrcellular carbon:nitrogen balance from Pseudomonas fluorescens FW300-N1B4

Subject, 1166 a.a., integral membrane sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  213 bits (542), Expect = 6e-59
 Identities = 146/504 (28%), Positives = 254/504 (50%), Gaps = 25/504 (4%)

Query: 8   MILISAAYLAVLFGVAWISERGMIPRAIIRHPLTYTLSLGVYASAWAFYGTVGLAYQYGY 67
           ++ IS +Y+ +LF +A++ ++        +H + Y+LSLGVY ++W F GT G A    +
Sbjct: 7   LVAISISYIGLLFLMAFLGDKYRGKWFAGQHTIIYSLSLGVYCTSWGFLGTAGQAANNSF 66

Query: 68  GFLSSYLGVSGAFLLAPVLLYPILKITRTYQLSSLADLFAFRF-RSTWAGALTTIFMLIG 126
            +L  Y+     F+ A   +  ++++     ++S+ADL A RF +S     + T   L G
Sbjct: 67  AYLPVYIAPILLFIFAWPFIQRVIRVCLKLNITSIADLLAARFGKSPLLAVVVTFVALFG 126

Query: 127 VLPLLALQIQAVADSISILTREPV--QHRVALSFCALITLFTIFFGSRHIATREKHEGLV 184
            LP +ALQ +A+ +S  IL ++ +    ++ L    ++  FTI FG R I   E+H G++
Sbjct: 127 TLPYIALQQKAIVNSYEILRQDHLLSSWQLGLVVSLILAGFTIVFGVRAIDVTERHPGMM 186

Query: 185 FAIAFESVIKLIAIGGVGLYALYGVFDGPQQLELWLLQNQTALAALHTPLQEGPWRT--- 241
            AIAFES +KLIA   +G++  + +FD P  +++W  +  T +  L        + +   
Sbjct: 187 LAIAFESFVKLIAYLTIGIFVSFFLFDSP--MDIW--RQATEIKPLEAEFNYPNFISLFG 242

Query: 242 LLLVFFASAIVMPHMYHMTFTENLNPRSLVSASWGLPLFLLLMS-LAVPLILWAGLKLGA 300
           LL++  ++ + +P  + +   E  + + ++ + W  PL++L+ +  A PL     +  G 
Sbjct: 243 LLIIVMSAFLCLPRQFQVLIVELKSQKHVLWSRWTFPLYVLVFAFFATPLGQAGNILYGD 302

Query: 301 TTNPEYFTLGIGIAANSKALALLAYVGGLSAASGLIIVTTLALSGMALNHLVLPL----- 355
           +   + + L + + +    L L +++G +SAAS ++I++T+ALS M  N +V P      
Sbjct: 303 SLQSDAYVLFLPVFSGDIWLGLFSFLGAISAASSMVIISTIALSTMLSNEIVFPTLFKIN 362

Query: 356 -YQPPAEGNIYRWLKWTRRALIVAIIMAGYGFYLMLGAEQDLANLGIVAFVATLQFLPGV 414
             Q          L   R+AL++ +I   YG +L +     LA+LG VAF A  Q  P +
Sbjct: 363 NIQSNDFHKFRSHLLNIRKALVLLVIFMSYGMFL-IAPPDTLASLGEVAFGAIAQIGPAL 421

Query: 415 LSVLYWPTANRRGFIAGLLAGILVWLVTMLLPLVGNLQGFYIPLLNMIYVLDDTSWHMAA 474
            +   W      G + G+ +G  +WLV  LLP +G L G   P     Y +      MA 
Sbjct: 422 FAAFLWRRVTLIGVLVGISSGFALWLVLNLLPQLG-LYGH--PFAGSGYSMTT----MAT 474

Query: 475 IASLAANVLMFTLISLFTNASPEE 498
           +  L  NV+   L+S FT  S  E
Sbjct: 475 LVGLFVNVMAIWLVSSFTRQSVHE 498



 Score = 47.4 bits (111), Expect = 6e-09
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 5/121 (4%)

Query: 860  WVEGDPQRLAQVLINLLSNARDASPPGSAVRVKSEAGEHTVDLIVEDEGSGIPSSIMDRL 919
            WV  D   L ++L NL+SNA   +  G  +      G+ T+ + V D+G GIP+     +
Sbjct: 891  WVRSDKVLLRRILQNLISNAFRYAGGGRILLGCRRHGD-TIAIQVVDDGPGIPADKQAVI 949

Query: 920  FEPFFTTKDPG----EGTGLGLALVYSIVEEHYGQITIDSPADVQSQRGTRIRVTLPRHV 975
            FE F   +  G     G GLGL +   + E    ++T+ S  +  S     + V  P+ V
Sbjct: 950  FEQFTRLQHSGHEGVNGLGLGLNIAQGLAELMQHRLTLSSQVNQGSIFSLSLSVAQPKLV 1009

Query: 976  E 976
            E
Sbjct: 1010 E 1010