Pairwise Alignments

Query, 982 a.a., Two-component sensor CbrA: intrcellular carbon:nitrogen balance from Pseudomonas fluorescens FW300-N1B4

Subject, 1140 a.a., integral membrane sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  217 bits (553), Expect = 3e-60
 Identities = 182/672 (27%), Positives = 329/672 (48%), Gaps = 47/672 (6%)

Query: 10  LISAAYLAVLFGVAWISER--GMIPRAIIRHPLTYTLSLGVYASAWAFYGTVGLAYQYGY 67
           +I+  Y+++LF +AW +ER  G I + I      Y LSL VY S+W+F GTVG + Q  +
Sbjct: 9   VIALLYVSLLFLLAWGAERWFGRITKKI--QTWIYGLSLAVYCSSWSFLGTVGQSAQDLW 66

Query: 68  GFLSSYLGVSGAFLLAPVLLYPILKITRTYQLSSLADLFAFRF-RSTWAGALTTIFMLIG 126
            FL  ++G    F     LL  ++ +++   ++S+AD  A R+ +S    A+ T+  L G
Sbjct: 67  SFLPIFVGPILIFTFGFGLLRKMVIVSKAQNITSVADFIAARYGKSQTIAAIVTLIALFG 126

Query: 127 VLPLLALQIQAVADSISILTREPVQHR---VALSFCALITLFTIFFGSRHIATREKHEGL 183
           ++P +ALQ++A+  S+++   E  Q+    V+L    ++ +F I FG+R +   E + G+
Sbjct: 127 IMPYIALQLKAMVFSLNLFQPEDAQYDGAWVSLIVTGILAMFAILFGTRKLDATEHNPGM 186

Query: 184 VFAIAFESVIKLIAIGGVGLYALYGVFDGPQQLELWLLQNQTALAALHTP-LQEGPWRTL 242
           + AIAFES++KL A   VG    +G FDG    ++W    +  L  ++ P L+       
Sbjct: 187 MLAIAFESLVKLAAFLLVGCVISFGFFDGFG--DIWAQATERQL--INNPELRLENLMPQ 242

Query: 243 LLVFFASAIVMPHMYHMTFTENLNPRSLVSASWGLPLFLLLMSLAV-PLILWAGLKLGAT 301
           LLV  A+ + MP  +H+   E  +  +LV A +  PL+L+L  + V PL L   L LG +
Sbjct: 243 LLVGMAAFLCMPRQFHVMMVECKDEPTLVKAKYLFPLYLILFGMFVAPLALAGKLMLGDS 302

Query: 302 TNPEYFTLGIGIAANSKALALLAYVGGLSAASGLIIVTTLALSGMALNHLVLPLYQPPAE 361
            + + + + + +A +   LA++A +G LSAA+G++IV  + +S M  N  ++PL     +
Sbjct: 303 VSADTYVINLPLALDQPMLAVIALLGTLSAATGMVIVAVVTISVMVSNEWLVPLMLHSGK 362

Query: 362 ------GNIYRWLKWTRRALIVAIIMAGYGFYLMLGAEQDLANLGIVAFVATLQFLPGVL 415
                     ++L   RR  IV I+  GY  YL       L+ LG+++F A  Q  P ++
Sbjct: 363 IRQKNFSQFSQFLLNARRIAIVLILGLGYFSYLSFMNSDSLSALGMLSFGAFAQLAPALI 422

Query: 416 SVLYWPTANRRGFIAGLLAGILVWLVTMLLPLVGNLQGFYIPLLNMIYVLDDTSWHMAAI 475
             +YW   NR G   GL+ G  +W   +L+  + + QG +   L ++  ++     +  +
Sbjct: 423 GGMYWKHGNRGGVYLGLIVGFGLWCY-ILVQGMSDSQGVFGGELALLDSINPNIRDI--L 479

Query: 476 ASLAANVLMFTLISLFTNASPEEASAAEACAV-DNVRRPQRRELHAASPQE---FATQLA 531
            +L AN+  + L S++  A   E   A A      ++    R+    S Q+    A++  
Sbjct: 480 TALLANLACYVLGSIWFRAGVAERIQASAFVTPGELKNTSNRKASPISQQDLLILASRFV 539

Query: 532 KPLGA-KAAQKEVEQALRDLYLPFDERRPYALRRLRDRIEANLSGLMGPSVAQDMVETFL 590
            P  A ++  +  ++A+R      D     A   L    E  L+G++G S A  ++++ L
Sbjct: 540 SPTRAYESFSRFSDEAVRS-----DSWHKVASPELIAHTEHMLAGVLGGSSASLVMDSVL 594

Query: 591 PYKAGGENYVTEDIHFIESRLEDYHSRLTGLAAELDALRRYHRQTLQELPMGVCSLAKDQ 650
             +              +  L++  S +   ++++   +   R  ++    G+  + K+ 
Sbjct: 595 QGR--------------DLALDEVFSLVDEASSKIILSQDMLRGAIEHAYEGMSVVDKEL 640

Query: 651 EILMWNKAMEEL 662
            ++ WN    EL
Sbjct: 641 NLVAWNYKYVEL 652



 Score = 47.0 bits (110), Expect = 7e-09
 Identities = 57/258 (22%), Positives = 108/258 (41%), Gaps = 30/258 (11%)

Query: 736  LTETQMLEDKLVHSERLASIGRLAAGVAHEIGNPITG----IACLAQNLREEREDDTELT 791
            L  +Q+LE K       AS  R  A V H++  P+       A LAQ    ++E  T L+
Sbjct: 762  LLNSQLLEAKAQEEIANASKSRFLAAVGHDLMQPLNAARLFTASLAQYPNLDQEGRTTLS 821

Query: 792  ------EISGQILEQTKRVSRIVQSLMSFAHAGSYQHSDEPVCLAEVAQDAIGLLALNRR 845
                  +I+G++L     +S++         +G  + +     +AE+ +          +
Sbjct: 822  HVNSSLKIAGELLTDLLDISKL--------DSGMVEVNRRDFSVAELLEGLAVEFDAMAK 873

Query: 846  NFEVQFYNLCDPDHWVEGDPQRLAQVLINLLSNARDASPPGSAVRVKSEAGEHTVDLIVE 905
            ++ ++F ++      +  D   L +VL N L+NA   +  G+ V +        +++ V 
Sbjct: 874  DYGIKF-SMVASSSIISSDLSLLRRVLQNFLTNAYRYA-KGNRVLLGCRHRAGALEIQVN 931

Query: 906  DEGSGIPSSIMDRLFEPFFTTKDPG----EGTGLGLALVYSIVE------EHYGQITIDS 955
            D G GI    +  +F+ F   ++P      G GLGLA+   I        +   ++ + S
Sbjct: 932  DTGCGIDEQELGEIFKEFKRLENPESKSVSGLGLGLAIADRIARVLGHDIKVVSKLGLGS 991

Query: 956  PADVQSQRGTRIRVTLPR 973
               +    G + +V LP+
Sbjct: 992  MFSITVPLGEKAKVALPK 1009