Pairwise Alignments

Query, 982 a.a., Two-component sensor CbrA: intrcellular carbon:nitrogen balance from Pseudomonas fluorescens FW300-N1B4

Subject, 1145 a.a., sensor histidine kinase/response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  240 bits (612), Expect = 5e-67
 Identities = 256/1035 (24%), Positives = 439/1035 (42%), Gaps = 114/1035 (11%)

Query: 10   LISAAYLAVLFGVAWISERGMIPRAIIRHPLTYTLSLGVYASAWAFYGTVGLAYQYGYGF 69
            +I+  Y+++LF +AW +ER           + Y LSL VY S+W+F GTVG + +  + F
Sbjct: 9    VIAICYVSLLFLLAWGAERWFSGVTKKLQVVIYGLSLAVYCSSWSFLGTVGQSAKDFWSF 68

Query: 70   LSSYLGVSGAFLLAPVLLYPILKITRTYQLSSLADLFAFRF-RSTWAGALTTIFMLIGVL 128
            +  ++G    F L   +L  ++ +++   ++S+AD  A R+ +S    A+ T+  + G++
Sbjct: 69   IPIFVGPILIFTLGFGMLRKMVLVSKAQNITSVADFIAARYGKSQTLAAIVTLIAMFGIM 128

Query: 129  PLLALQIQAVADSISIL--TREPVQH-RVALSFCALITLFTIFFGSRHIATREKHEGLVF 185
            P +ALQ++A+  S+++     +P+    +AL   AL+ +F I FG+R +   E + G++ 
Sbjct: 129  PYIALQLKAMVFSLNLFQPADDPLNGVTIALLITALLAIFAILFGTRKLDATEHNPGMML 188

Query: 186  AIAFESVIKLIAIGGVGLYALYGVFDGPQQLELWLLQNQTALAALHTPLQEGPWRTL--- 242
            AIAFES++KL A   VG+   +GVFDG    ++W   +  +L     P  E    TL   
Sbjct: 189  AIAFESLVKLAAFLLVGIVISFGVFDGFG--DIWQQASDKSLIHHPNPRIE----TLMPE 242

Query: 243  LLVFFASAIVMPHMYHMTFTENLNPRSLVSASWGLPLFLLLMSLAV-PLILWAGLKLGAT 301
            LLV  A+ + MP  +H+   E  +   L    W  PL+L L  L V PL L   L LG +
Sbjct: 243  LLVGMAAFLCMPRQFHVMVVECADESVLSKGRWLFPLYLALFGLFVGPLALAGKLILGDS 302

Query: 302  TNPEYFTLGIGIAANSKALALLAYVGGLSAASGLIIVTTLALSGMALNHLVLPLYQPPAE 361
               + + + + +A +   LA++A +G LSAA+G++IV  + +S M  N  ++P+      
Sbjct: 303  VAADTYVINLPLALDHPLLAVIALLGTLSAATGMVIVAVVTISVMVSNEWLVPVVL--RT 360

Query: 362  GNIY--------RWLKWTRRALIVAIIMAGYGFYLMLGAEQDLANLGIVAFVATLQFLPG 413
            GNI         + L   RR  IV I+  GYG YL L     L++LG+++F A  Q  P 
Sbjct: 361  GNIREKNFSQFSQMLLNARRLAIVIILGLGYGSYLALADSDSLSHLGMLSFGAFAQLAPA 420

Query: 414  VLSVLYWPTANRRGFIAGLLAGILVWLVTMLLPLVGNLQGFYIPLLNMIYVLDDTSWHMA 473
            ++  LYW   NR G   GL  G  +W   ML  + GN     +   N+  +   T     
Sbjct: 421  LVGGLYWKHGNRAGVFLGLSVGFSLWFYIMLSGMTGNQSPAALMSSNIDLLDAITPNVRD 480

Query: 474  AIASLAANVLMFTLISLFTNASPEEASAAEACAVDNVRRPQRRELHAASPQEFATQLAKP 533
            A+ +L AN+  + L S++  A   E   A A       +    +      Q+    LA  
Sbjct: 481  ALTALFANIACYVLGSIWFRAGVAERIQASAFVSPGKLKNNASKKSGPISQQDLLILASR 540

Query: 534  LGAKAAQKEVEQALRDLYLPFDERRPYALRRLRDRIEANLSGLMGPSVAQDMVETFLPYK 593
              +     E         +  D     A   L    E  L+G++G S A  ++++ L  +
Sbjct: 541  FVSPTRAYESFSRFSTEAVKSDSWHKAATPELIAHTERLLAGVLGASSASLVMDSVLQGR 600

Query: 594  -------------AGGENYVTEDIHFIESRLEDYHSRLTGLAAELDALR-RYHRQTLQEL 639
                         A  +  +++D+  +   +E  +  ++ + ++L+ +   Y    L + 
Sbjct: 601  DLALDEVFSLVDEASSKIMLSQDM--LRGAIEHAYEGMSVIDSDLNLVAWNYKYVELYQY 658

Query: 640  PMGVCSLAKD-QEILMWNKAMEELTGIAAQRVVGSRLSTIADPWKEL------------L 686
            P G         E++ +N A       A ++ V  R+  + +                 +
Sbjct: 659  PEGFLQQGMPISEVIRFNAARGYCGSGAIEQQVEKRVQHMRNGTPHTSERQRKDGKVIKI 718

Query: 687  QGFINLPDEHLHKQHLALDGQTRWLNLHKAAIDEPLAPGNSGLVLLVEDLT------ETQ 740
            QG   +PD       +     T++    +A ++      N  L   V++ T       ++
Sbjct: 719  QG-NPMPDGGF---VMTFTDITQYRQQERALLE-----ANETLESRVKERTFELAMLNSE 769

Query: 741  MLEDKLVHSERLASIGRLAAGVAHEIGNPITGIACLAQNLREEREDDTELTEISGQILEQ 800
            +LE K       AS  R  A V H++  P+        +L +    D E       +   
Sbjct: 770  LLEAKAQEEMANASKSRFLAAVGHDLMQPLNAARLFTASLSQYPNLDREARTTLSHVNSS 829

Query: 801  TKRVSRIVQSLMSFAHAGSYQHSDEPVCLAEVAQDAIGLLALNRRNF---------EVQF 851
             K    ++  L+  +   S                  G++ +NRR+F          V+F
Sbjct: 830  LKTAGELLTDLLDISKLDS------------------GMVDVNRRDFAISELLNGLSVEF 871

Query: 852  ----------YNLCDPDHWVEGDPQRLAQVLINLLSNARDASPPGSAVRVKSEAGEHTVD 901
                      + +      V  DP  L +VL N L+NA   +  G  +      G   ++
Sbjct: 872  EAMAADNQIRFKMIPCSATVNSDPSLLRRVLQNFLTNAYRYARGGRVLFGCRHRGSE-LE 930

Query: 902  LIVEDEGSGIPSSIMDRLFEPFFTTKDPG----EGTGLGLALVYSIVEEHYGQITIDSPA 957
            + V D G GI       +F+ F    +P      G GLGLA+   I       I + S  
Sbjct: 931  IQVLDTGCGIDEHETHEIFKEFKRLNNPRSKSVSGLGLGLAIADRISRVLNHGIQVSS-- 988

Query: 958  DVQSQRGTRIRVTLP 972
              Q  RG+   +T+P
Sbjct: 989  --QLGRGSVFSITVP 1001