Pairwise Alignments

Query, 478 a.a., Two-component sensor CbrB: intrcellular carbon:nitrogen balance from Pseudomonas fluorescens FW300-N1B4

Subject, 450 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  315 bits (806), Expect = 3e-90
 Identities = 171/390 (43%), Positives = 243/390 (62%), Gaps = 14/390 (3%)

Query: 3   HILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIPTFDLIVSDLRLPGAPGTE 62
           HIL+VEDE   R+ + ++L  NQY V  A SV++A         DL+ SD +L    G +
Sbjct: 7   HILVVEDEPDQRALIVQMLTANQYLVESADSVEQAIVMIKASAPDLVFSDWKLGQLTGMD 66

Query: 63  LIKLGQ----GTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDRQS 118
           L+   +        +I T+Y ++  AVD+M+ GA DY+AKP+    +L A+ ++ +    
Sbjct: 67  LLNYVRREHPDMGFIIATAYGTITHAVDAMQAGADDYLAKPYQRQSLLLAIEKVAKS--- 123

Query: 119 AQASGEPVVGKTSNGAAKNGVDNSNGEIGIIGSCPPMQDLYSKIRKVAPTDSNVLIQGES 178
                  +  K  N    + +      +G++G    MQ +Y ++++V+ TD+ VLI GES
Sbjct: 124 -------IALKRQNRRLSSELSQQQELVGLVGRSALMQKVYQRVQRVSATDATVLIGGES 176

Query: 179 GTGKELVARALHNLSKRAKAPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLVEA 238
           GTGKEL ARAL+ LS R+  P +++NC AIPESL E+ELFG EKGA+TGA+  + G +EA
Sbjct: 177 GTGKELAARALYQLSARSHKPFVAINCGAIPESLAEAELFGAEKGAYTGANTQKIGKLEA 236

Query: 239 ADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAKI 298
           ADGGT+FLDEIGELPL  Q +LLR LQEG I R+G     K+DVR+IAATHRDL+     
Sbjct: 237 ADGGTVFLDEIGELPLLQQTKLLRFLQEGVISRLGQNSEIKLDVRVIAATHRDLQQEVAE 296

Query: 299 GQFREDLYYRLHVIALKLPALRERGADVNEIATAFLARQSARVGRTDLKFALDAEQAIRH 358
           G+FREDLYYRL+V+ + +PALRER  D+  +   FL   + + G    K + D  +++  
Sbjct: 297 GRFREDLYYRLNVVPIHMPALRERPEDIGRLVEHFLKLHANQYGMEVPKLSRDTLKSLLD 356

Query: 359 YSWPGNVRELENAVERAVILCESPEISAEL 388
           +SWPGNVREL N +ER V+L +  E+  EL
Sbjct: 357 HSWPGNVRELANRIERFVLLGDEEEMVQEL 386