Pairwise Alignments

Query, 478 a.a., Two-component sensor CbrB: intrcellular carbon:nitrogen balance from Pseudomonas fluorescens FW300-N1B4

Subject, 476 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  303 bits (776), Expect = 8e-87
 Identities = 185/484 (38%), Positives = 281/484 (58%), Gaps = 32/484 (6%)

Query: 1   MPHILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIPTFDLIVSDLRLPGAPG 60
           M  ILIV+D+  +R + +RLL    + V  A S ++          + ++ D+R+PG  G
Sbjct: 1   MAKILIVDDDHQLRQSFQRLLAVEGHDVRGASSGEQGLRMVREELPECVIMDVRMPGMNG 60

Query: 61  TELIK----LGQGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDR 116
            + +K    +    PV+IMT+YA+  +A+++ K GA DYI KPFD  ++L  + +     
Sbjct: 61  LDALKALREIDARLPVIIMTAYATTETAIEATKFGAFDYILKPFDIPDILALIDK----- 115

Query: 117 QSAQASGEPVVGKTSNGAAKNGVDNSNGEIGIIGSCPPMQDLYSKIRKVAPTDSNVLIQG 176
             A  +G  + G+ +        D  + E  ++G+   M ++Y  I + APTD+ VL++G
Sbjct: 116 --AVEAGRRMRGRVAMTPEPG--DGGDAE-ALVGTSRAMHEVYKAIGRAAPTDALVLVRG 170

Query: 177 ESGTGKELVARALHNLSKRAKAPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLV 236
           ESGTGKELVARA++  S RA+ P + +NC AIP++L+ESELFG+EKGAFTGA+  R G +
Sbjct: 171 ESGTGKELVARAIYQHSLRAERPYLVINCVAIPDTLLESELFGYEKGAFTGATHRRVGKI 230

Query: 237 EAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLA 296
           E A GGT+FLDEIG++PL  QA+LLR+LQE +I R+G  ++  VDVR+IAAT+ DL++  
Sbjct: 231 EQASGGTVFLDEIGDMPLGIQAKLLRLLQERQIERLGGRETIPVDVRIIAATNTDLEAAV 290

Query: 297 KIGQFREDLYYRLHVIALKLPALRERGADVNEIATAFLARQSARVGRTDLKFALDAEQAI 356
             G+FREDLYYRL V+ L LP LRER  D+  +A  FL+R +  +   D   + +A   +
Sbjct: 291 ADGRFREDLYYRLKVVTLWLPPLRERREDIPPLARFFLSRFAREMDTPDPGISTEALAYM 350

Query: 357 RHYSWPGNVRELENAVERAVILCES-----PEISAELLGIDIELSDLD-----DDDFIGL 406
             + WPGNVREL NA+++A++          +I   L G+    S  +      DD + L
Sbjct: 351 EAHPWPGNVRELGNAIQKALVFNRGAPLLPEDIRQALEGVRGSTSTREGDEGAGDDLLQL 410

Query: 407 APQQGNGAGNTSHEPTEDLSLEDYFQHFVLEHQDHMT---ETELARKLGVSRKCLWERRQ 463
             +  +G  + + E     ++ D+    V+      T    T  AR LG+SR  L  R +
Sbjct: 411 VRRTLSGGDDNAFE-----TIMDHVGRIVVREALQYTGGNRTRAARLLGMSRPTLLARME 465

Query: 464 RLGI 467
           R G+
Sbjct: 466 RYGL 469