Pairwise Alignments

Query, 478 a.a., Two-component sensor CbrB: intrcellular carbon:nitrogen balance from Pseudomonas fluorescens FW300-N1B4

Subject, 459 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  305 bits (781), Expect = 2e-87
 Identities = 180/474 (37%), Positives = 281/474 (59%), Gaps = 20/474 (4%)

Query: 1   MPHILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIPTFDLIVSDLRLPGAPG 60
           M H+L+++DE   R  +R ++E   + V EAGS +E  E        +++ D+R+PG  G
Sbjct: 1   MKHLLVIDDEPGHRLMVRAVMEDVGWHVVEAGSGEEGLELLVHEQVHVVLLDMRMPGMDG 60

Query: 61  TE----LIKLGQGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDR 116
            E    ++++  G PV+++T+Y ++ SAV++MK GA DY+ KP D++E++  + +    R
Sbjct: 61  QETLARILEIQPGLPVVMLTAYGTVGSAVEAMKCGAFDYLTKPADNEELVAVLEKAWEHR 120

Query: 117 QSAQASGEPVVGKTSNGAAKNGVDNSNGEIGIIGSCPPMQDLYSKIRKVAPTDSNVLIQG 176
           +    + E           K  V+N +    ++G+   M  +   IR+  P+++ VLI G
Sbjct: 121 RLVVENEE---------LRKRYVEN-DPTAPLVGASQVMHRMRDFIRQAGPSEATVLIMG 170

Query: 177 ESGTGKELVARALHNLSKRAKAPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLV 236
           ESGTGKEL+A+ALH+ S RA+ P++ VNCAA+P  L+ESELFG+ +GAFTGA   + G  
Sbjct: 171 ESGTGKELIAQALHDASTRARQPLVKVNCAALPGHLLESELFGYVRGAFTGAVKDKPGRF 230

Query: 237 EAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLA 296
           + A GGTLFLDEIGELPLE QA+LLRVLQE  +  +G V+   VDVR+IAAT+RDL+   
Sbjct: 231 QLARGGTLFLDEIGELPLELQAKLLRVLQERVVEPLGGVRPVSVDVRIIAATNRDLRREV 290

Query: 297 KIGQFREDLYYRLHVIALKLPALRERGADVNEIATAFLARQSARVGRTDLKFALDAEQAI 356
             G FREDLY+RL+V+ +  P LR+R  D+ ++    L +   +  ++    + D  +A+
Sbjct: 291 AKGTFREDLYFRLNVLEVVSPPLRKRMEDLPQLVEELLGKLCRKNRKSIRCISADFFEAL 350

Query: 357 RHYSWPGNVRELENAVERAVILCESPEISAELLGIDIELSDLDDDDFIGLAPQQGNGAGN 416
             +SWPGNVRELEN +ERA+IL  +  +SA+ L   +      D+  +    Q+     +
Sbjct: 351 SRHSWPGNVRELENVLERALILSRTDSLSADALPPQL----FGDEPQVADMQQERPVVDD 406

Query: 417 TSHEPTEDLSLEDYFQHFVLEHQDHMTETELARKLGVSRKCLWERRQRLGIPRR 470
            S   + D + +      +  H  H  +T  A  LG+SR+ L  + ++ G+ RR
Sbjct: 407 DSRPCSLDEAEKGELLRALDVHGGHREKT--ADALGISRRTLQYKLKKFGLTRR 458