Pairwise Alignments

Query, 466 a.a., Poly(A) polymerase (EC 2.7.7.19) from Pseudomonas fluorescens FW300-N1B4

Subject, 480 a.a., poly(A) polymerase (RefSeq) from Shewanella loihica PV-4

 Score =  389 bits (998), Expect = e-112
 Identities = 200/437 (45%), Positives = 285/437 (65%), Gaps = 10/437 (2%)

Query: 24  EVLNSGQHSLQKAQFSRYAVNIVERLQNAGYQAYLVGGCVRDMLLGITPKDFDVATSATP 83
           E++    H++ +   S  A+ ++ RL  +G++AYLVGG VRD+LLG+ PKDFDV T+ATP
Sbjct: 50  EIVARKHHAISRQHISENAIKVLYRLHKSGFKAYLVGGGVRDILLGLEPKDFDVVTNATP 109

Query: 84  EQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRANHPQNDEDEDSNQSSRNESGRILR 143
           E+++  FRN R++GRRF+L HI FGR++IEVAT R +H  + E      S  N  GR+LR
Sbjct: 110 EEIKKLFRNCRLVGRRFRLAHIVFGRDVIEVATLRGHHVDSGE----KISKVNAEGRLLR 165

Query: 144 DNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGVHDIRNHLIRLIGDPKQRYQEDPV 203
           DNVYGT++EDA+RRDFT+NALYYD     I  Y  G+ D+ +  +RLIGDP++RY+EDPV
Sbjct: 166 DNVYGTIDEDAERRDFTVNALYYDISDFSIHSYGGGLQDLESRTLRLIGDPQKRYREDPV 225

Query: 204 RMLRAVRFAAKLNFGIEKHSATPIRELAPLLREIPSARLFEEVLKLFLSGYAADTFEMLV 263
           RMLRAVRFA KL   I+K +A PI ELAPLL++IP+AR++EEVLKLF +G A + + M+ 
Sbjct: 226 RMLRAVRFATKLGMSIDKAAAQPISELAPLLKDIPAARMYEEVLKLFFAGQAQNNYVMMR 285

Query: 264 DLQLFDPLFPASAAALEYNPT-YTHTLISEALINTDLRIKQNKPVTPAFLFAALLWPALP 322
           D  LF PLFP     LE +P   +H ++   + NTD R++Q+K VTPAF +AA+LW  L 
Sbjct: 286 DFGLFAPLFPLVDNLLEEDPKGPSHKMVKAIMRNTDERVEQDKSVTPAFFYAAMLWYPLS 345

Query: 323 ARVLRLQ-ERGMPPIPAMQEAAHELIAEQCQRIAIPKRFTMPIREIWDMQERLPRRSGKR 381
            R   +  E G+    A   A  +++ +QC+ I+IP+RF+ P ++IW +Q R  R  G R
Sbjct: 346 QRADDIALESGLSQYDAFYAAMGDVMEQQCRTISIPRRFSTPAKDIWQLQLRFERNQGTR 405

Query: 382 ADLLLDNPRFRAGYDFLLLR-ESAGEQTDGLGEWWTDYQDANDSERRDMIRDLSGKDDGT 440
           A   +++P+FRA YD LLLR E+ G        WW  + + ++ +R  + R     + G+
Sbjct: 406 AFKFIEHPKFRAAYDLLLLRAEAEGGNLAKTAAWWKSFVEGSEEQRSVIAR---STNKGS 462

Query: 441 GAPRKRRRSGGAKRKRA 457
            +   RRR    K  +A
Sbjct: 463 RSRNNRRRRSPKKTPKA 479