Pairwise Alignments

Query, 466 a.a., Poly(A) polymerase (EC 2.7.7.19) from Pseudomonas fluorescens FW300-N1B4

Subject, 438 a.a., polyA polymerase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  399 bits (1024), Expect = e-115
 Identities = 208/431 (48%), Positives = 291/431 (67%), Gaps = 10/431 (2%)

Query: 31  HSLQKAQFSRYAVNIVERLQNAGYQAYLVGGCVRDMLLGITPKDFDVATSATPEQVRAEF 90
           HS+ + Q S  A+ ++ RL  AG+QAYLVGG VRD+LLG+ PKDFDV T+ATPE+++  F
Sbjct: 9   HSISRKQISENALKVLYRLNKAGFQAYLVGGGVRDLLLGLEPKDFDVVTNATPEEIKKLF 68

Query: 91  RNARIIGRRFKLVHIHFGREIIEVATFRANHPQNDEDEDSNQSSRNESGRILRDNVYGTL 150
           RN R++GRRF+L HI FGR++IEVATFR +H +++E      S  N  GR+LRDNVYG +
Sbjct: 69  RNCRVVGRRFRLAHIVFGRDVIEVATFRGHHGESNE----KISKANAEGRLLRDNVYGEI 124

Query: 151 EEDAQRRDFTINALYYDPVSERILDYANGVHDIRNHLIRLIGDPKQRYQEDPVRMLRAVR 210
           +EDA+RRDFT+NALYYD     I  Y  G+ D++   +RLIGDP+ RY+EDPVRMLRAVR
Sbjct: 125 DEDAERRDFTVNALYYDISDYSIRSYGGGMEDLKAGTLRLIGDPETRYREDPVRMLRAVR 184

Query: 211 FAAKLNFGIEKHSATPIRELAPLLREIPSARLFEEVLKLFLSGYAADTFEMLVDLQLFDP 270
           FA KL+  I++ +A PI++LAPLL++IP+AR++EEVLKLF +G A   F+M+ + +LF P
Sbjct: 185 FATKLSMTIDEVTAKPIKQLAPLLKDIPAARMYEEVLKLFFAGKAVANFDMMQEYKLFAP 244

Query: 271 LFPASAAALEYNPTYTHTLISEALI-NTDLRIKQNKPVTPAFLFAALLWPALPARVLRLQ 329
           LFP   A L+  P      + +A++ +TD R+ ++KPVTP+F +AA+LW  L  R   + 
Sbjct: 245 LFPQVDALLKEAPKGPAMKMVQAIMKSTDDRVNEDKPVTPSFFYAAILWYPLRQRAEDIA 304

Query: 330 -ERGMPPIPAMQEAAHELIAEQCQRIAIPKRFTMPIREIWDMQERLPRRSGKRADLLLDN 388
            E G+    A   A  +++ +QCQ I+IP+RF+ P ++IW +Q R  R  G RA  LL++
Sbjct: 305 VESGLTLYDAFFAAMGDVMEQQCQTISIPRRFSTPAKDIWQLQLRFERSQGTRAFKLLEH 364

Query: 389 PRFRAGYDFLLLR-ESAGEQTDGLGEWWTDYQDANDSERRDMIRD---LSGKDDGTGAPR 444
           P+FRA YD LLLR E  G        WW  + +A+++ER  + R     SG  +     R
Sbjct: 365 PKFRAAYDLLLLRGEVEGGNLAKSAAWWQQFVEADETERLTIARSGNKASGNRNRNTPQR 424

Query: 445 KRRRSGGAKRK 455
           +RRR  GAK K
Sbjct: 425 RRRRPSGAKAK 435