Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens FW300-N1B4

Subject, 596 a.a., Acyl-CoA dehydrogenase (NCBI) from Rhodospirillum rubrum S1H

 Score =  622 bits (1603), Expect = 0.0
 Identities = 317/590 (53%), Positives = 405/590 (68%), Gaps = 8/590 (1%)

Query: 1   MADYKAPLRDMRFVLNEVFEVAKLWAELPALAETVDAETVEAILEEAGKVTSKSIAPLSR 60
           MA YKAPLRDMR+VL ++F+ A L   LP   E   A+ ++ +LEEA K+    + PL+R
Sbjct: 1   MAGYKAPLRDMRYVLYDLFDGASL-TTLPGYEEFT-ADLIDPVLEEAAKICEDVLQPLNR 58

Query: 61  AADEEGCHWADGAVTTPAGFPQAYQTYAEGGWVGVGGDPTYGGMGMPKAVSAQVEEMVNS 120
             DEEGC   +G V TP GFP+AY+T+ EGGW  +  DP +GG G+P+ V+  +EEM+ +
Sbjct: 59  PGDEEGCVLENGVVRTPKGFPEAYRTFREGGWTSITCDPAHGGQGLPQVVNTFIEEMICA 118

Query: 121 ASLSFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGVWAGSMCLTEPHAGTDLGIIRT 180
           A+LSFG+YP L+ GA +++    +E+ KA YLP +  G W G+MCLTEP  GTDLG++RT
Sbjct: 119 ANLSFGMYPGLSHGAYVALKQFGTEDQKARYLPALVDGTWTGTMCLTEPQCGTDLGLLRT 178

Query: 181 KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVNA 240
           KA P  +G YK++GTKIFI+ G+HDLTENI+HLVLA+LPDAP G KGISLFLVPK +V  
Sbjct: 179 KAVPDGEGGYKITGTKIFISAGDHDLTENILHLVLARLPDAPKGIKGISLFLVPKVLVTE 238

Query: 241 DGSLGARNPANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKGLAAMFTMMNYERLGV 300
           +G+LG RN   CG++EHKMGI+AS+TCV+NFDEA G+L+GEP+KG+ AMF MMN  RLGV
Sbjct: 239 EGALGDRNAVTCGALEHKMGIKASSTCVLNFDEATGWLIGEPHKGMRAMFAMMNTARLGV 298

Query: 301 GIQGLATGERSYQNAIEYARDRLQSRSPTGAQNKDKVADPIIVHPDVRRMLLTMKASNEG 360
           G+QGL   E SYQ A+ YARDRLQ RSP+G +  DK ADP+IVHPDVRRMLLT +A  EG
Sbjct: 299 GVQGLGLAEASYQGAVAYARDRLQGRSPSGVKAPDKPADPLIVHPDVRRMLLTQRAIVEG 358

Query: 361 GRAFSTYVAMQLDTAKFSEDATTRKRAEDLVALLTPVAKAFLTDLGLETTVHGQQVFGGH 420
           GRA + +V + LD    + D  TR  A + VAL+TPV KA LTDLG E T  G QVFGGH
Sbjct: 359 GRALAAWVGLALDRQHHAGDPATRAEAGEFVALMTPVVKALLTDLGSEATNLGVQVFGGH 418

Query: 421 GYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFYTLFADEIRHFTATAN 480
           GYIRE G EQ +RD RITQIYEGTNGIQALDLVGRK+  + G     F   +  +     
Sbjct: 419 GYIREHGMEQYIRDCRITQIYEGTNGIQALDLVGRKLPENAGRNLRRFFHPVADYIEARL 478

Query: 481 AD--LAEFTQPLNDAVDTLDELTAWLLDRAKNNPNEIGAASVEYLQAFGYMAYAYMWALM 538
            D  LAEF  PL      L + TA +       P E  AA+ +Y +  G+ A AY+WA M
Sbjct: 479 DDDTLAEFVGPLAKTFVRLQQATAQVARVGMTKPAEAAAAATDYQRLLGFTALAYLWARM 538

Query: 539 AKAAFGK----EAQDDFYASKLGTARFYFARLLPRIHSLSASVKAGSESL 584
           A+ +  K    E  D F+++K+ TAR +  RLLP+   L A++ AG  SL
Sbjct: 539 AELSLPKAGTAEDNDAFHSAKVATARVFMERLLPQTSGLFATIMAGGRSL 588