Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  197 bits (500), Expect = 7e-55
 Identities = 124/372 (33%), Positives = 207/372 (55%), Gaps = 9/372 (2%)

Query: 42  LPTLVLLLGGAYCAVYRRQRELFLMVTVYIAYFLLDTQTDYYRDNGKVRDDAAVVFHLCC 101
           LP ++ L+      ++++ R   + +T+ +AY+L+  +           +   +   +  
Sbjct: 44  LPYILFLIALTVAHIFKQSRIAMVAMTMLLAYWLIQIRLQ----TPLTVNSTMLELIMLS 99

Query: 102 LLLPLLFGLFAAWQERTHLFQDMVARFAVLLAFGSVALGLEQSYPQALLMWLSE-IRWPA 160
           LLLP+   L  A++      +  ++  A+LL F   A   +    +     L+E I +  
Sbjct: 100 LLLPVACFLPYAYKNAGLFSKSFLSYLAILLLFIFWAWLTQLHIGETDHSSLTEGIFFVV 159

Query: 161 LHGAWMSLIQLSYPVFIASFLLLAWQYWRNPRPLHAAQLVGLLGLFWMLPKTFILPFTLN 220
              + + L+ ++Y V +A    ++         +     + L    ++L   F +P+   
Sbjct: 160 PQISRLPLVVVAYLVALAGIAAISVLTRNQILDVVVYSSIVLSMNAFVL---FHVPYIST 216

Query: 221 IMCSQVMLMIAAAVAHEAYQMAFRDELTGLPGRRALNERMQRLGRNYVLAMGDVDHFKKF 280
           IM +   L+I   +    Y+MAF D LT +PGR+AL++ ++ +GR + LAM DVDHFKKF
Sbjct: 217 IMFTLSGLLILVYLISAGYEMAFNDPLTQIPGRQALDQDLKHIGRKFTLAMLDVDHFKKF 276

Query: 281 NDTHGHDVGDQVLRLVASKLSKISGGGRAYRYGGEEFALVFAGKTLEECMPHLEVIRESI 340
           NDT+GHD GD VLRLVAS+L +I+G  R YRYGGEEF++++ GK  +E +P +E +R+ I
Sbjct: 277 NDTYGHDTGDDVLRLVASRLREINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDI 336

Query: 341 ATYNIQLRNQDNRPQDDQQGRQRRA-GSGASSVSVTVSIGVAERLEQRTPEEVLKSADQA 399
            +Y + +R+ + RP+   +G ++R+  S +  V++T+SIGV +    R P E LK+AD A
Sbjct: 337 ESYELVIRDTNQRPKSHAEGAKKRSRKSNSDIVTITISIGVCDSELYRHPIEALKAADGA 396

Query: 400 LYSAKGAGRNCV 411
           LY AK AGRNCV
Sbjct: 397 LYKAKQAGRNCV 408