Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 393 a.a., GGDEF family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 90.5 bits (223), Expect = 8e-23
 Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 37/227 (16%)

Query: 194 LHAAQLVGLLGLFWMLPKTFILPFTLNIMCSQVMLMIAAAVAHEAYQMAFRDELTGLPGR 253
           +H A+ V +L  +       +L  ++N++     L     +  +   +A RD LTGL  R
Sbjct: 187 IHTAEAVPMLWFY------LVLSLSINVVAMGNAL---TRLVQKIRVLADRDMLTGLWNR 237

Query: 254 RA-------LNERMQRLGRNYVLAMGDVDHFKKFNDTHGHDVGDQVLRLVASKLS-KISG 305
           R+       LN R Q+    + + + D+DHFKK ND  GH  GD  LR  A  LS  +  
Sbjct: 238 RSAELRLRELNLRWQKGREPFAIVLLDLDHFKKINDKLGHQAGDAALRQAALILSHSLRE 297

Query: 306 GGRAYRYGGEEFALVFAGKTLEECMPHLEVIRESIATYNIQLRNQDNRPQDDQQGRQRRA 365
                R+GGEEF ++ +G  +++     E +RES+A   +       R  DD+       
Sbjct: 298 TDMLCRFGGEEFLVILSGVGIKQAHLVAEKLRESLAATAL-------RWDDDE------- 343

Query: 366 GSGASSVSVTVSIGVAERLEQRTPEEVLKSADQALYSAKGAGRNCVM 412
                 V ++ S G A  ++  +  +++ +AD A+Y AK  GRNCVM
Sbjct: 344 ------VVLSASFGCAAMVDGMSVSQLISAADHAMYQAKAGGRNCVM 384