Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 385 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 98.2 bits (243), Expect = 4e-25
 Identities = 72/186 (38%), Positives = 96/186 (51%), Gaps = 26/186 (13%)

Query: 231 AAAVAHEAYQMAFRDELTGLPGRRALNERMQRL---GRNYVLAMGDVDHFKKFNDTHGHD 287
           AA    E   +A  D LTGLP RRA   R++R     R++ L + DVDHFK+ NDT GH 
Sbjct: 204 AAQNEQELQYLADTDSLTGLPNRRAFMGRLERTIKDRRSFSLLIIDVDHFKQINDTTGHQ 263

Query: 288 VGDQVLRLVASKLSK-ISGGGRAYRYGGEEFALV-FAGKTLEECMPHLEVIRESIATYNI 345
            GD  L+ +A++L+  I G   A R GGEEFA+V F    LE  +   E +R++IA+ + 
Sbjct: 264 TGDAALQFLANQLNACIQGEDFAGRIGGEEFAMVQFCASPLEH-LVRAESLRKTIASAHP 322

Query: 346 QLRNQDNRPQDDQQGRQRRAGSGASSVSVTVSIGVAERLEQRTPEEVLKSADQALYSAKG 405
            L                    G   V +TVSIGV       +   ++  AD ALY AK 
Sbjct: 323 DL--------------------GVGPVYLTVSIGVCMATPPVSLITLMAMADNALYEAKR 362

Query: 406 AGRNCV 411
           +GRNCV
Sbjct: 363 SGRNCV 368