Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 347 a.a., GGDEF family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 62/181 (34%), Positives = 90/181 (49%), Gaps = 22/181 (12%)

Query: 237 EAYQMAFRDELTGLPGRRALNERMQRL----GRNYVLAMGDVDHFKKFNDTHGHDVGDQV 292
           E+ +  F D LTG   RRA +  +  L         L + D+DHFK FND +GH +GDQV
Sbjct: 180 ESEKDVFFDALTGCLNRRAFDADLAGLLALAPEGCCLILCDIDHFKHFNDNYGHQLGDQV 239

Query: 293 LRLVASKLSKISGGG-RAYRYGGEEFALVFAGKTLEECMPHLEVIRESIATYNIQLRNQD 351
           L+LV  +L++    G + YRYGGEEFAL+     L       E IR  +    ++ R +D
Sbjct: 240 LKLVGKRLTEACRDGVKCYRYGGEEFALLVPSSNLRIARQLAEGIRRGVEKLTLKDRRRD 299

Query: 352 NRPQDDQQGRQRRAGSGASSVSVTVSIGVAERLEQRTPEEVLKSADQALYSAKGAGRNCV 411
            R                   +++ S GVA+   + T   +++ +D+ LY AK  GRN V
Sbjct: 300 ARID-----------------NISASFGVAQWQPKMTARNLIEHSDKQLYEAKRLGRNRV 342

Query: 412 M 412
           M
Sbjct: 343 M 343