Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 355 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  100 bits (249), Expect = 7e-26
 Identities = 67/176 (38%), Positives = 91/176 (51%), Gaps = 22/176 (12%)

Query: 241 MAFRDELTGLPGRRALNERMQR----LGRNYVLAMGDVDHFKKFNDTHGHDVGDQVLRLV 296
           ++  D+LTGL  RRA   R+ +          L + D+DHFK+FNDT GH+ GD+VL  V
Sbjct: 193 ISLTDKLTGLNNRRAFESRLAQEFLPSTPKCSLLVIDIDHFKQFNDTWGHNAGDKVLVYV 252

Query: 297 ASKLSK-ISGGGRAYRYGGEEFALVFAGKTLEECMPHLEVIRESIATYNIQLRNQDNRPQ 355
           A  L + + G     RYGGEEF +V    + E+     E +R+ IA   + L+ +DN   
Sbjct: 253 AQNLKQAVKGEDLVARYGGEEFVIVLKDTSAEDAANIAEKLRDRIANKKLTLK-KDN--- 308

Query: 356 DDQQGRQRRAGSGASSVSVTVSIGVAERLEQRTPEEVLKSADQALYSAKGAGRNCV 411
                             V+VSIGVA+     TPE+  + AD ALY AKG GRN V
Sbjct: 309 -------------LDLGKVSVSIGVAKAYANETPEQFFERADGALYRAKGTGRNRV 351