Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 518 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 94.7 bits (234), Expect = 6e-24
 Identities = 62/184 (33%), Positives = 88/184 (47%), Gaps = 28/184 (15%)

Query: 237 EAYQMAFRDELTGLPGRRALNERMQRLGRNYV-------LAMGDVDHFKKFNDTHGHDVG 289
           E  ++   D LT LP R AL ERM++  RNY        +A+ D+DHFK  ND  GH  G
Sbjct: 352 EQQKLNLLDTLTQLPNRAALEERMEQEFRNYQRHRHPLWVAVADIDHFKSINDNFGHSTG 411

Query: 290 DQVLRLVASKL-SKISGGGRAYRYGGEEFALVFAGKTLEECMPHLEVIRESIATYNIQLR 348
           D+ L+++A  L + +       RYGGEEF L+    +  +    L  +RE +     + +
Sbjct: 412 DKTLQVIAMALKNSLRESEFVARYGGEEFVLLIPDVSANDIEQLLNRVREKVKNIPFKFK 471

Query: 349 NQDNRPQDDQQGRQRRAGSGASSVSVTVSIGVAERLEQRTPEEVLKSADQALYSAKGAGR 408
           NQ                     ++VTVSIG A+ LE     E  + AD ALY AK   R
Sbjct: 472 NQ--------------------RITVTVSIGAAQILENEQISETFERADAALYKAKHESR 511

Query: 409 NCVM 412
           + V+
Sbjct: 512 DRVI 515