Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 347 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 68/175 (38%), Positives = 90/175 (51%), Gaps = 24/175 (13%)

Query: 245 DELTGLPGRRALNE-------RMQRLGRNYVLAMGDVDHFKKFNDTHGHDVGDQVLRLVA 297
           D+LT L  RRA +E       R +R  R   L + D+D+FK+FNDTHGH VGD+VL  +A
Sbjct: 187 DQLTSLRNRRAFDEEVLGHIQRFRREQRLSSLLLVDIDNFKQFNDTHGHLVGDKVLAYIA 246

Query: 298 SKLSK-ISGGGRAYRYGGEEFALVFAGKTLEECMPHLEVIRESIATYNIQLRNQDNRPQD 356
             L + + G     RYGGEEF ++         M   E +R  IA  ++ +         
Sbjct: 247 LALKQGVKGDDFVARYGGEEFVILLPDTEHSGAMVVAEQLRARIAERHLSI--------- 297

Query: 357 DQQGRQRRAGSGASSVSVTVSIGVAERLEQRTPEEVLKSADQALYSAKGAGRNCV 411
              G+ ++   GA    +TVSIGVA        E  L  AD+ALY AK AGRNCV
Sbjct: 298 ---GKDKKLSLGA----ITVSIGVATLRLDDDRESYLVRADEALYRAKSAGRNCV 345