Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 467 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score = 87.4 bits (215), Expect = 8e-22
 Identities = 64/181 (35%), Positives = 88/181 (48%), Gaps = 24/181 (13%)

Query: 238 AYQMAFRDELTGLPGRRALNERMQRLGRN---YVLAMGDVDHFKKFNDTHGHDVGDQVLR 294
           A Q A  D L+GL  RR    ++  L      Y +AM D+D+FK  NDT+G  VGD+V++
Sbjct: 305 AVQEALYDPLSGLLNRRGFMPQLTNLNGQTVRYSVAMLDLDNFKMINDTYGDSVGDRVIQ 364

Query: 295 LVASKLSKIS-GGGRAYRYGGEEFALVFAGKTLEECMPHLEVIRESIATYNIQLRNQDNR 353
           L+A  +   S     A R GGEEFALV      E+  P LE IR+S A  +I        
Sbjct: 365 LLAQLIHNHSRSQDIAARLGGEEFALVLRDIDAEQVYPVLERIRKSFAEMSIAAEEH--- 421

Query: 354 PQDDQQGRQRRAGSGASSVSVTVSIGVAERLEQRTPEEVLKSADQALYSAKGAGRNCVMA 413
                            ++  TVSIG  E  +    E +L  AD+ALY AK  G+N ++ 
Sbjct: 422 -----------------TIYCTVSIGWVEYQQGIAGESLLHLADKALYQAKAKGKNTIVK 464

Query: 414 F 414
           +
Sbjct: 465 Y 465