Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 342 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 24/178 (13%)

Query: 242 AFRDELTGLPGRRA----LNERMQRLGRNYV---LAMGDVDHFKKFNDTHGHDVGDQVLR 294
           A  D+LT L  RRA    + + + R  + +    L + D+D FK FND +GH VGD+VL 
Sbjct: 179 AMTDQLTSLHNRRAYEIAIQDHIHRAEQQHTRCSLLLIDIDRFKVFNDNYGHQVGDKVLA 238

Query: 295 LVASKLSK-ISGGGRAYRYGGEEFALVFAGKTLEECMPHLEVIRESIATYNIQLRNQDNR 353
            VA  L + + G     RYGGEEF ++       + +   E +RE I+   + +      
Sbjct: 239 YVALALKQCVRGDDFVARYGGEEFVVLLPNTHFHDALQVAETLRERISERRLAI------ 292

Query: 354 PQDDQQGRQRRAGSGASSVSVTVSIGVAERLEQRTPEEVLKSADQALYSAKGAGRNCV 411
                 G+ ++   GA    +TVSIG+A   E    + +   AD+ALY AK  GRNCV
Sbjct: 293 ------GKDKKLSLGA----ITVSIGLASLQEGDDADTLFSRADKALYEAKSDGRNCV 340