Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 347 a.a., diguanylate cyclase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

 Score = 98.6 bits (244), Expect = 3e-25
 Identities = 65/187 (34%), Positives = 98/187 (52%), Gaps = 29/187 (15%)

Query: 237 EAYQMAFRDELTGLPGRRALNERMQRL-------GRNYVLAMGDVDHFKKFNDTHGHDVG 289
           E   +A  D LTG   RR   +++++        G+++   + D+DHFK  ND  GH  G
Sbjct: 176 ELEYLASTDHLTGAANRRVFTQKIRQAMTEFHENGQSFFFGLMDIDHFKMLNDQFGHSAG 235

Query: 290 DQVL-RLVASKLSKISGGGRAYRYGGEEFALVFAGKTLEECMPHLEVIRESIATYNIQLR 348
           D VL R+VA   + ++  G+ +R GGEEFA++F  ++  E +     IRE+IA   +   
Sbjct: 236 DYVLQRIVAISETMMTSPGKFFRIGGEEFAIIFPEQSEYEPLRFFNDIREAIA---LAAM 292

Query: 349 NQDNRPQDDQQGRQRRAGSGASSVSVTVSIG-VAERLEQRTPEEVLKSADQALYSAKGAG 407
           + D  P                 +SV+VSIG  A  +   TPE +L+ +D+ALY AK AG
Sbjct: 293 DYDGIP-----------------ISVSVSIGFTAMHIHDNTPESLLRRSDKALYQAKLAG 335

Query: 408 RNCVMAF 414
           RN V+ F
Sbjct: 336 RNRVLMF 342