Pairwise Alignments

Query, 429 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 325 a.a., diguanylate cyclase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

 Score = 93.6 bits (231), Expect = 8e-24
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 33/206 (16%)

Query: 218 TLNIMCSQVMLMIAAA-VAHEAYQMAFRDELTGLPGRRALN-------ERMQRLGRNYVL 269
           +L  +  QV+ ++    V  + +  +  D LTG+  RRA +        R QR G+++VL
Sbjct: 141 SLQALSRQVIAILELKKVGEQLHNTSMTDALTGVNNRRAFDLKFEAEFARWQRTGQSFVL 200

Query: 270 AMGDVDHFKKFNDTHGHDVGDQVLRLVASKLSKISGGGRAY-RYGGEEFALVFAGKTLEE 328
           A+ D+DHFK FND++GH  GD+ L  VA+   + S     + RYGGEEF L+  G     
Sbjct: 201 ALIDIDHFKSFNDSYGHAAGDEALSQVAALFQRHSRNYDFFARYGGEEFVLILPGTDTAS 260

Query: 329 CMPHLEVIRESIATYNIQLRNQDNRPQDDQQGRQRRAGSGASSVSVTVSIGVAERLEQRT 388
               LE +R  +A +   LR                         +TVSIG+A       
Sbjct: 261 ANKTLEKLRLVVANHEWLLR------------------------QLTVSIGLASADLFDD 296

Query: 389 PEEVLKSADQALYSAKGAGRNCVMAF 414
            +++L+ ADQ LY AK  GRN    F
Sbjct: 297 KKQLLEVADQMLYKAKTQGRNQTSVF 322