Pairwise Alignments

Query, 168 a.a., Ribosomal protein S6 glutaminyl transferase from Pseudomonas fluorescens FW300-N1B4

Subject, 308 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 43.1 bits (100), Expect = 4e-09
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 16/156 (10%)

Query: 2   KSLLALLSLVALPVLAA----EPTLYGRYEYIALPEIGGEVLKAKMDTGALTASLSAKDI 57
           K+L   L+LVAL +LA     +  + G+   + + E  G V +A++DTGA   SL A D+
Sbjct: 18  KALTKALTLVALFLLAPAYGDDKAVIGQTAMMTVDE-AGLVYQARIDTGAGNTSLHAFDL 76

Query: 58  E----TFTRDGDEWVRFRLATKGASNKVYEHKVARISKIKTRSEEDDDDKEAIEPTKRPV 113
           E    +  +  D   +    T    N   E K      +KT +  +    E      R +
Sbjct: 77  EIQGGSAKKMADNVGKTIWFT--TENVAGERKRLSAKIVKTSTVSNSQGTET-----RYM 129

Query: 114 VDLELCLGNVKRTVEVNLTDRSSFNYPLLIGAKALR 149
           V++ +      R V+VNL DR   +Y LLIG   L+
Sbjct: 130 VEMHVGFAGETRKVKVNLRDRGHMDYKLLIGRNWLK 165



 Score = 31.6 bits (70), Expect = 1e-05
 Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 8/116 (6%)

Query: 36  GEVLKAKMDTGALTASLSAKD--IETFTRDGDEWVRFRLATKGASNKVYEHKVARISKIK 93
           G +   ++DTGA+  SL A D  +E    D ++ V   LA         E++     ++ 
Sbjct: 190 GLLFDTRIDTGAVENSLHAVDLKVENGVEDMEQNVGKMLAF------TTENEKGETKRVH 243

Query: 94  TRSEEDDDDKEAIEPTKRPVVDLELCLGNVKRTVEVNLTDRSSFNYPLLIGAKALR 149
            R  E    + A     R +V+L +     +  V+VNL DR+     LLIG   L+
Sbjct: 244 ARIVETSLIRNAQGSEVRYMVELNVGEPGREYKVKVNLRDRTKMTNKLLIGRNWLQ 299