Pairwise Alignments

Query, 281 a.a., L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 283 a.a., glycine/betaine/L-proline ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  225 bits (573), Expect = 1e-63
 Identities = 129/268 (48%), Positives = 171/268 (63%), Gaps = 8/268 (2%)

Query: 6   KIPLGQYIAGF----VEWLTQNGASTFDAIAVSLETMIHGVTFALTWFNPLALIGLIALL 61
           +IPLG ++  F    VEW +      F  +A +   M+  +  ++    P A I ++ALL
Sbjct: 8   RIPLGAWLEAFTDNMVEWCS-GATRAFSTVAGNGIDMLESLLGSIP---PWAFIPVVALL 63

Query: 62  AHFIQRKWGLTVFVIASFLLILNLGYWQETMETLAQVLFATLVCVLIGVPLGIVAAHKPM 121
           A    RK G+  F +  F LI NLG W+ TM T+A VL AT + V+ GVPLGI AA    
Sbjct: 64  AWRATRKPGIGAFALLGFGLIWNLGLWEATMSTIALVLVATALAVVTGVPLGIAAAVNVT 123

Query: 122 FYTVMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVPD 181
              V+ PVLDLMQT+P FVYLIP +  FGLG V  + +TVVFA+   IR T LGIR VPD
Sbjct: 124 VRKVLMPVLDLMQTMPAFVYLIPAIPFFGLGKVAAVFATVVFAMPPAIRFTCLGIRQVPD 183

Query: 182 ELMDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPVV 241
           +L++  +AFG SR Q L ++ELP A P+I AG+ Q IML+LSMVVIAA++GA GLG  V 
Sbjct: 184 DLVECAEAFGTSRWQRLVKLELPLAAPTILAGVNQTIMLALSMVVIAAMIGARGLGGEVW 243

Query: 242 NALNTADIALGFEAGLAIVLLAIMLDRI 269
            A+   ++  GFEAG+ IV++AI LDR+
Sbjct: 244 KAIQRLELGSGFEAGIGIVIVAICLDRV 271