Pairwise Alignments

Query, 389 a.a., Arabinose efflux permease from Pseudomonas fluorescens FW300-N1B4

Subject, 390 a.a., transmembrane efflux protein from Marinobacter adhaerens HP15

 Score =  315 bits (808), Expect = 1e-90
 Identities = 174/379 (45%), Positives = 248/379 (65%), Gaps = 13/379 (3%)

Query: 1   MPLALLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPHAGLLITGYALGVVFGAPILAV 60
           MP+AL AL ++AF IGTTEFVI+GL+P +A+DL V++P AGLL++ YALGV  GAP+L  
Sbjct: 1   MPIALFALTLSAFAIGTTEFVIVGLVPTIAQDLGVTLPSAGLLVSLYALGVAVGAPVLTA 60

Query: 61  GTANMPRKATLLGMTLMFILGNILCALAPNYATLMAARVITALCHGAFFGIGSVVAAGLV 120
            T    RK  LL +  +FI+GN+L  +APNYA+LM AR++T L HG FF IGS +A  LV
Sbjct: 61  LTGRWNRKWVLLSLMSLFIIGNVLAWMAPNYASLMTARILTGLAHGVFFSIGSTIATSLV 120

Query: 121 APNKRAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTFWAVSVIGVIAAIAQWVWLPK 180
           + +K A AIA+MFTGLT+A V GVPLGT +GQ  GWR+TF  V+ +G IA +   + +PK
Sbjct: 121 SKDKEASAIAIMFTGLTVALVTGVPLGTFIGQTFGWRATFLTVAALGAIALVGSALLVPK 180

Query: 181 EIPMD-KANLASEFKVLGKVNVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGVTI 239
            +     A L  + +V+    +LL   M+ +     F+ FTY+ PILQD+TG +   V+I
Sbjct: 181 NLKQSAPATLRQQLEVITHPRLLLVYAMTAVGYGGTFTAFTYLTPILQDVTGFASGVVSI 240

Query: 240 MLLLFGVGLTAGSMLGGRLADSRLLP--SLVGMALAVVVVLAAFSQTSHSVIPAAITLVL 297
           +LL++GV +  G++ GG+LAD RL P  +L  +   +  +L A + ++++ I A ITL++
Sbjct: 241 LLLVYGVSVATGNIWGGKLAD-RLGPTSALYIIFGGLAAILFALTFSAYNPIAAVITLLV 299

Query: 298 WGIFAFALCPILQLLIIDQAH----EAPNLGSTLNQSAFNLGNAAGAWIGGLVVASGADL 353
           WG FAF   P LQ+ ++  A      + ++ S LN +AFN+G A GAW+GG VV  G  L
Sbjct: 300 WGAFAFGNVPGLQVYVVQLAERFTPHSVDVASGLNIAAFNIGIAGGAWLGGYVV-EGMGL 358

Query: 354 ADLPWTGALVSGLTVLTAL 372
            + PW G    G+ VL+AL
Sbjct: 359 MNTPWIG----GVIVLSAL 373