Pairwise Alignments

Query, 619 a.a., ATP-dependent RNA helicase RhlE from Pseudomonas fluorescens FW300-N1B4

Subject, 440 a.a., DEAD/DEAH box helicase domain protein from Marinobacter adhaerens HP15

 Score =  477 bits (1228), Expect = e-139
 Identities = 259/467 (55%), Positives = 323/467 (69%), Gaps = 27/467 (5%)

Query: 1   MSFASLGLSEALVRAIEAAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
           MSF+SLGLSE LVRA    GY  P+P+Q +AIPAVL GRD+M AAQTGTGKT GF LP+L
Sbjct: 1   MSFSSLGLSEQLVRATSDQGYETPSPIQAQAIPAVLSGRDVMAAAQTGTGKTAGFTLPLL 60

Query: 61  ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKVYARDLKFVSACIFGGVGMN 120
           +RL  N    K        PR L+LTPTRELAAQVH+S  +Y++ +   +A +FGGV +N
Sbjct: 61  QRLGENPRTGKG-------PRALILTPTRELAAQVHDSVNLYSKYIPTKAAVVFGGVKIN 113

Query: 121 PQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR 180
           PQ+  + +G+DVLVA PGRL+DL  Q +V  + VEILVLDEADRMLDMGF+ D++K+L+ 
Sbjct: 114 PQMMKLRKGLDVLVATPGRLMDLYQQNAVRFNEVEILVLDEADRMLDMGFIRDIRKILSL 173

Query: 181 LPSKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPANHKRSLL 240
           LP+KRQNLLFSATFS +I  LA  LL NP ++EV   NT+ E I+Q V+ +  + K +LL
Sbjct: 174 LPAKRQNLLFSATFSNEIRTLAEGLLDNPVQVEVAARNTSAENIKQSVYPVDQSQKTALL 233

Query: 241 AHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLTAVAIHGNKSQNARTKALADFKAGEV 300
           + L+   +W+QVLVFTRTKHGANRL + L+K G+TA AIHGNKSQ ART+ALADFKAGEV
Sbjct: 234 SKLVRDNSWDQVLVFTRTKHGANRLTQKLEKDGITAAAIHGNKSQGARTRALADFKAGEV 293

Query: 301 RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKL 360
           R+LVATDIAARGLDI QLP VVNFELPNV EDYVHRIGRTGRAG SG A+SLV+ DE K+
Sbjct: 294 RVLVATDIAARGLDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADEGKM 353

Query: 361 LKSIERMTKQKIADGNLMGFDSSAVEAEKPEVRERPDVRNPRNPRGPRGDGPNGSGGGGG 420
           L  IER+ K+++    + GF+ +     KP+ +  P           R    NG+GGG G
Sbjct: 354 LAGIERLIKKQLPRTEVEGFEPTNNLPLKPKAKADPS----------RARNRNGNGGGNG 403

Query: 421 RKDKGKDKGGKEKPAATGRGDRPAREHKPREGTPAREQQRPAPRAAA 467
           R       GGK K      G +P      R      ++ RPA R +A
Sbjct: 404 R------PGGKPK----SFGAKPGGRSGGRSQNGGGQRSRPAQRQSA 440