Pairwise Alignments

Query, 145 a.a., Putative Holliday junction resolvase YggF from Pseudomonas fluorescens FW300-N1B4

Subject, 141 a.a., conserved hypothetical protein TIGR00250 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  142 bits (359), Expect = 2e-39
 Identities = 69/139 (49%), Positives = 95/139 (68%), Gaps = 1/139 (0%)

Query: 1   MALRLILGFDYGTKQIGVAVGQVITGQARELCTLKAQNGIPDWNQVEALIKEWKPDAVVV 60
           M  + +LGFD+GTK IGVAVGQ IT  A  L ++KA +GIP+W ++  LI+EW+PD VVV
Sbjct: 1   MNAKTVLGFDFGTKSIGVAVGQQITASATPLLSIKAVDGIPNWEEIAKLIQEWQPDLVVV 60

Query: 61  GLPLNMDGTPSDMCLRAEKFARRLNGRYNLPFYTHDERLTTFEAKGERLVRGGQKGSYRD 120
           GLPLNMDGT  +M  RA KFA RLN ++ +  +T DERLTT +AK      GG K +   
Sbjct: 61  GLPLNMDGTEQEMTHRARKFANRLNAKFGVKIFTQDERLTTTDAKARLFELGGYK-ALTK 119

Query: 121 NPVDAIAAALLLQGWLDEN 139
             VDA++A L+++ + + +
Sbjct: 120 GQVDAVSAVLIIESYFENH 138