Pairwise Alignments

Query, 145 a.a., Putative Holliday junction resolvase YggF from Pseudomonas fluorescens FW300-N1B4

Subject, 138 a.a., putative endonuclease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 53.1 bits (126), Expect = 2e-12
 Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 7/135 (5%)

Query: 6   ILGFDYGTKQIGVAVGQVITGQARELCTLKAQNGIPDWNQVEALIKEWKPDAVVVGLPLN 65
           I+  DYG K+ G+AV   +   A  L T+     +   N +   + +   + +++GLP  
Sbjct: 4   IVAIDYGRKRTGIAVSDTLQLIANGLTTVPTHELL---NFIGGYVAKEPVERIIIGLPKQ 60

Query: 66  MDGTPSDMCLRAEKFARRLNGRY-NLPFYTHDERLTTFEAKGERLVRGGQKGSYRDNP-- 122
           M+   S+     E F R L  R+  LP    DER T+  A    ++  G K   R N   
Sbjct: 61  MNNEASENMKNIEPFVRSLKKRFPELPVEYVDERFTSVLAH-RTMLEAGLKKKDRQNKAL 119

Query: 123 VDAIAAALLLQGWLD 137
           VD I+A ++LQ +L+
Sbjct: 120 VDEISATIILQTYLE 134