Pairwise Alignments

Query, 205 a.a., Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 204 a.a., RNA methyltransferase, RsmD family from Pseudomonas stutzeri RCH2

 Score =  277 bits (708), Expect = 1e-79
 Identities = 132/199 (66%), Positives = 159/199 (79%), Gaps = 4/199 (2%)

Query: 1   MARPSRPKKPVHNVHNGVNQLRIIGGEWGSRKLSFPDAPGLRPTPDRVRETLFNWLAPYV 60
           MA P  P +P    H G  QLRIIGGEW SR+ SFPDA GLRPTPDRVRETLFNW+APY+
Sbjct: 1   MANP--PIRP--GAHGGQGQLRIIGGEWRSRRFSFPDAEGLRPTPDRVRETLFNWIAPYL 56

Query: 61  AGAKVLDPFAGSGALFLEALSRGAAMGQALDASNIAVASIKEHLGTLRCTTGQVQTADAL 120
           +GA+VLDPF GSGA++LEALSRGA+M  ALD +  A+AS+++HL TL C  GQ+  +DAL
Sbjct: 57  SGARVLDPFTGSGAIYLEALSRGASMALALDVNANAIASLRKHLDTLNCGHGQLLQSDAL 116

Query: 121 RYLETQPATAFDLVFLDPPFNQNLLPAVCTLLEERHWLSDDAWVYTESETAPSILGLPEN 180
           RYL+TQ  T FDLVFLDPPFN+NLL   C LLE + WL++ AW+YTESE  PS LGLP N
Sbjct: 117 RYLDTQSPTPFDLVFLDPPFNKNLLQPACELLETKGWLAEHAWIYTESEAVPSSLGLPGN 176

Query: 181 WRLHREQKSGRVYYALWQR 199
           WRLHRE+K+G+V+YALW+R
Sbjct: 177 WRLHREKKAGKVHYALWER 195